RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 PLAG1Q6DJT9 500 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 TTC19Q6DKK2 380 aaPredicted RBP3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 OR52E8Q6IFG1 317 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 ANKRD26P1Q6NSI1 321 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 FAM180BQ6P0A1 224 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 IGFL2Q6UWQ7 119 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 CCDC81Q6ZN84 652 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 IKBIPQ70UQ0 350 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 CPEB2Q7Z5Q1 589 aaKnown RBP3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 ZNF227Q86WZ6 799 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 FUNDC1Q8IVP5 155 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 OR4N5Q8IXE1 308 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 PRSS58Q8IYP2 241 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 LIX1Q8N485 282 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 KIF2BQ8N4N8 673 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 KRTCAP2Q8N6L1 136 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 ZNF615Q8N8J6 731 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 ZNF441Q8N8Z8 693 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 EXD3Q8N9H8 876 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 CLHC1Q8NHS4 586 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 PSMA8Q8TAA3 256 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 ZNF675Q8TD23 568 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 LRRC8CQ8TDW0 803 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 ZNF721Q8TF20 911 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 RNF138Q8WVD3 245 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 C10orf82Q8WW14 230 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 THAP4Q8WY91 577 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 COQ8BQ96D53 544 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 GIMAP5Q96F15 307 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 FAR2Q96K12 515 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 PPP3R2Q96LZ3 170 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 Q96M66 194 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 BBC3Q96PG8 261 aaPredicted RBP3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 PAIP2Q9BPZ3 127 aaKnown RBP3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 C1orf50Q9BV19 199 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 NUDT9Q9BW91 350 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 ACBD3Q9H3P7 528 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 CLMPQ9H6B4 373 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 RPF2Q9H7B2 306 aaKnown RBP3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 COPS7BQ9H9Q2 264 aaPredicted RBP3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 CXorf21Q9HAI6 301 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 ZBTB20Q9HC78 741 aaPredicted RBP3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 ADAP2Q9NPF8 381 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 SERHLQ9NQF3 203 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 PRTFDC1Q9NRG1 225 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 SDR39U1Q9NRG7 319 aaPredicted RBP3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 SLC6A13Q9NSD5 602 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 SIRT3Q9NTG7 399 aaPredicted RBP3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 FGFR1OP2Q9NVK5 253 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 IRAK4Q9NWZ3 460 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 MS4A12Q9NXJ0 267 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 MAT2BQ9NZL9 334 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 EHD3Q9NZN3 535 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 NTMQ9P121 344 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 VTI1BQ9UEU0 232 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 BAIAP2L1Q9UHR4 511 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 FBXL4Q9UKA2 621 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 FBXW2Q9UKT8 454 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 DTX4Q9Y2E6 619 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 PADI2Q9Y2J8 665 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 TMED5Q9Y3A6 229 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 SPTA1P02549 2419 aa3.52□□□□□ -1.85
SMARCE1-215ENST00000578995 UBR5O95071 2799 aaPredicted RBP3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 NBASA2RRP1 2371 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 A0A088AWK7 358 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 TRBV5-3A0A0A0MS03 114 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 PRAMEF27A3QJZ7 478 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 ARGFXA6NJG6 315 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 GABRR3A8MPY1 467 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 B4DXG7 233 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 C9JVG2 144 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 SLCO1B7G3V0H7 640 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 PLOD2O00469 737 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 RRP8O43159 456 aaKnown RBP3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 SEC22BO75396 215 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 IGHEP01854 428 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 SERPINA7P05543 415 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 HEXBP07686 556 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 CD63P08962 238 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 SLC35E2P0CK97 266 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 PRKAR1AP10644 381 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 KITP10721 976 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 LAMP1P11279 417 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 PRPS2P11908 318 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 LBPP18428 481 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 ZNF10P21506 573 aaPredicted RBP3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 JAK1P23458 1154 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 OTX2P32243 289 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 LSP1P33241 339 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 ARL1P40616 181 aaPredicted RBP3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 EMDP50402 254 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 CDK9P50750 372 aaKnown RBP3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 MVDP53602 400 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 SEC24CP53992 1094 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 AQP5P55064 265 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 UCNP55089 124 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 CLDN8P56748 225 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 SLC37A1P57057 533 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 ERVFRD-1P60508 538 aa3.51□□□□□ -1.85
SMARCE1-215ENST00000578995 UFM1P61960 85 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms