RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 FKBP6O75344 327 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 PDE9AO76083 593 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 IFNA14P01570 189 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 BMP2P12643 396 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 LIFP15018 202 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 MAOAP21397 527 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 FOLR3P41439 243 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 EMP2P54851 167 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 ACTR3P61158 418 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 RPS18P62269 152 aaKnown RBP13□□□□□ -0.33
CSNK1D-209ENST00000578904 ELF3P78545 371 aaPredicted RBP13□□□□□ -0.33
CSNK1D-209ENST00000578904 RHAGQ02094 409 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 SELPLGQ14242 412 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 NKG7Q16617 165 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 VMACQ2NL98 169 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 DDX59Q5T1V6 619 aaKnown RBP eCLIP13□□□□□ -0.33
CSNK1D-209ENST00000578904 GLYATQ6IB77 296 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 SHISA6Q6ZSJ9 500 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 TMEM151BQ8IW70 566 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 AQP12AQ8IXF9 295 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 ADCY4Q8NFM4 1077 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 OR14A16Q8NHC5 309 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 MIPOL1Q8TD10 442 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 ADAMTS15Q8TE58 950 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 NCLNQ969V3 563 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 RSRC1Q96IZ7 334 aaKnown RBP13□□□□□ -0.33
CSNK1D-209ENST00000578904 NSMCE2Q96MF7 247 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 DCBLD2Q96PD2 775 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 GPR87Q9BY21 358 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 DPH1Q9BZG8 443 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 PIF1Q9H611 641 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 EPS8L2Q9H6S3 715 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 CACYBPQ9HB71 228 aaKnown RBP13□□□□□ -0.33
CSNK1D-209ENST00000578904 PNO1Q9NRX1 252 aaKnown RBP13□□□□□ -0.33
CSNK1D-209ENST00000578904 MAT2BQ9NZL9 334 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 CALML5Q9NZT1 146 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 P2RX2Q9UBL9 471 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 PRODH2Q9UF12 536 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 PACSIN3Q9UKS6 424 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 LIPT1Q9Y234 373 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 ANGPT4Q9Y264 503 aa13□□□□□ -0.33
CSNK1D-209ENST00000578904 FARSAQ9Y285 508 aaKnown RBP13□□□□□ -0.33
CSNK1D-209ENST00000578904 PTRH2Q9Y3E5 179 aaKnown RBP13□□□□□ -0.33
CSNK1D-209ENST00000578904 IGKV3D-11A0A0A0MRZ8 115 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 TCRBV16S1A1N1A0A5B0 115 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 C17orf105B2RV13 164 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 UPK1AO00322 258 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 CNOT3O75175 753 aaKnown RBP12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 ALOX12BO75342 701 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 JRKO75564 520 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 HMGN2P05204 90 aaKnown RBP12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 UMPSP11172 480 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 GGT1P19440 569 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 F8A1P23610 371 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 PCGF2P35227 344 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 POLE2P56282 527 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 FOXL2P58012 376 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 DUSP2Q05923 314 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 LASP1Q14847 261 aaKnown RBP12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 KPNB1Q14974 876 aaKnown RBP12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 LTB4RQ15722 352 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 FXNQ16595 210 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 LCN8Q6JVE9 175 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 CDC73Q6P1J9 531 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 ZFP1Q6P2D0 407 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 AAGABQ6PD74 315 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 SPATA24Q86W54 205 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 SHISA5Q8N114 240 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 CDRT4Q8N9R6 151 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 FAM156AQ8NDB6 213 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 BHLHE22Q8NFJ8 381 aaPredicted RBP12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 OR7G2Q8NG99 324 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 FAM162AQ96A26 154 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 CTHRC1Q96CG8 243 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 RNF145Q96MT1 663 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 SPSB2Q99619 263 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 CRB3Q9BUF7 120 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 TRIM8Q9BZR9 551 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 VN1R1Q9GZP7 353 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 RASSF4Q9H2L5 321 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 IKZF5Q9H5V7 419 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 DENND2DQ9H6A0 471 aaPredicted RBP12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 TRIM45Q9H8W5 580 aaPredicted RBP12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 GORASP2Q9H8Y8 452 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 NECTIN3Q9NQS3 549 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 GIN1Q9NXP7 522 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 COPS7AQ9UBW8 275 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 EGFL7Q9UHF1 273 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 C3orf18Q9UK00 162 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 RPS6KA6Q9UK32 745 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 TCFL5Q9UL49 500 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 ERVK-11Q9UQG0 969 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 RAXQ9Y2V3 346 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 MRPS18BQ9Y676 258 aaKnown RBP12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 ASPMQ8IZT6 3477 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 USP24Q9UPU5 2620 aa12.99□□□□□ -0.33
CSNK1D-209ENST00000578904 FREM2Q5SZK8 3169 aa12.98□□□□□ -0.33
CSNK1D-209ENST00000578904 APC2O95996 2303 aa12.98□□□□□ -0.33
CSNK1D-209ENST00000578904 IDSB3KWA1 339 aa12.98□□□□□ -0.33
CSNK1D-209ENST00000578904 CXCR6O00574 342 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms