RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 STATHP02808 62 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 ZNF888P0CJ79 500 aaPredicted RBP9.52□□□□□ -0.89
SS18-210ENST00000578700 NCK1P16333 377 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 AGXTP21549 392 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 UQCRC2P22695 453 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 FASP25445 335 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 GPC1P35052 558 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 SOX11P35716 441 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 CRATP43155 626 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 OR4D2P58180 307 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 CHRNB3Q05901 458 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 TAF11Q15544 211 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 FXNQ16595 210 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 NDUFA9Q16795 377 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 GRAMD1BQ3KR37 738 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 GTDC1Q4AE62 458 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 FCRL6Q6DN72 434 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 FBXO42Q6P3S6 717 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 ZNF517Q6ZMY9 492 aaPredicted RBP9.52□□□□□ -0.89
SS18-210ENST00000578700 RNF44Q7L0R7 432 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 SLC30A8Q8IWU4 369 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 MSRB3Q8IXL7 192 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 SLC34A3Q8N130 599 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 EID3Q8N140 333 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 ZADH2Q8N4Q0 377 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 CSNK1A1LQ8N752 337 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 C19orf47Q8N9M1 422 aaKnown RBP9.52□□□□□ -0.89
SS18-210ENST00000578700 CLEC1AQ8NC01 280 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 ICA1LQ8NDH6 482 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 OR1L3Q8NH93 324 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 EXOSC8Q96B26 276 aaKnown RBP9.52□□□□□ -0.89
SS18-210ENST00000578700 TM4SF19Q96DZ7 209 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 FER1L6-AS2Q96M78 137 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 LRFN5Q96NI6 719 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 MACROD1Q9BQ69 325 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 SLC35A5Q9BS91 424 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 ZNF717Q9BY31 904 aaPredicted RBP9.52□□□□□ -0.89
SS18-210ENST00000578700 KLHL31Q9H511 634 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 PRDM7Q9NQW5 492 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 C1GALT1Q9NS00 363 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 SEMA3GQ9NS98 782 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 ACSS1Q9NUB1 689 aaPredicted RBP9.52□□□□□ -0.89
SS18-210ENST00000578700 CCM2LQ9NUG4 571 aaPredicted RBP9.52□□□□□ -0.89
SS18-210ENST00000578700 IRAK4Q9NWZ3 460 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 TAS2R7Q9NYW3 318 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 GPN3Q9UHW5 284 aaPredicted RBP9.52□□□□□ -0.89
SS18-210ENST00000578700 SERTAD3Q9UJW9 196 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 RPS6KA6Q9UK32 745 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 UTS2RQ9UKP6 389 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 FBXW2Q9UKT8 454 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 SAMD4AQ9UPU9 718 aaKnown RBP9.52□□□□□ -0.89
SS18-210ENST00000578700 NTNG1Q9Y2I2 539 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 C15orf41Q9Y2V0 281 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 SNX8Q9Y5X2 465 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 NF1P21359 2839 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 HIVEP1P15822 2718 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 FER1L5A0AVI2 2057 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 PRSS44E7EML9 344 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 H0YGG7 62 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 CASQ2O14958 399 aaPredicted RBP9.51□□□□□ -0.89
SS18-210ENST00000578700 ZNF749O43361 778 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 TMPRSS11DO60235 418 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 SRPX2O60687 465 aaPredicted RBP9.51□□□□□ -0.89
SS18-210ENST00000578700 ZG16O60844 167 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 CTSVO60911 334 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 ALPPP05187 535 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 NR2F6P10588 404 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 PVRP15151 417 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 ALOX12P18054 663 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 GPX2P18283 190 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 EFNA1P20827 205 aaPredicted RBP9.51□□□□□ -0.89
SS18-210ENST00000578700 CPN2P22792 545 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 CERS1P27544 350 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 PTPN6P29350 595 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 MPIP34949 423 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 RORAP35398 523 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 HSPA13P48723 471 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 VSX2P58304 361 aaPredicted RBP9.51□□□□□ -0.89
SS18-210ENST00000578700 ARF3P61204 181 aaPredicted RBP9.51□□□□□ -0.89
SS18-210ENST00000578700 HBA1P69905 142 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 RBBP4Q09028 425 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 HYAL2Q12891 473 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 FADDQ13158 208 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 VEZF1Q14119 521 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 NCF4Q15080 339 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 ZNF385BQ569K4 471 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 INTS11Q5TA45 600 aaKnown RBP9.51□□□□□ -0.89
SS18-210ENST00000578700 C1orf189Q5VU69 101 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 FAM198BQ6UWH4 519 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 FKBP9P1Q75LS8 142 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 VN1R4Q7Z5H5 301 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 CALHM3Q86XJ0 350 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 CARFQ8N187 725 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 GALNT16Q8N428 558 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 KCT2Q8NC54 265 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 ADCY4Q8NFM4 1077 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 OR52E4Q8NGH9 312 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 OR52N2Q8NGI0 321 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 ZCCHC10Q8TBK6 192 aa9.51□□□□□ -0.89
SS18-210ENST00000578700 ZFP90Q8TF47 636 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms