RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 EGLN2Q96KS0 407 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 CCT7Q99832 543 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 DEFB127Q9H1M4 99 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 ZNF703Q9H7S9 590 aaPredicted RBP11.98□□□□□ -0.49
CNOT1-220ENST00000569916 EML4Q9HC35 981 aaKnown RBP11.98□□□□□ -0.49
CNOT1-220ENST00000569916 TAS2R7Q9NYW3 318 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 SUCOQ9UBS9 1254 aaKnown RBP11.98□□□□□ -0.49
CNOT1-220ENST00000569916 PRODH2Q9UF12 536 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 WBP11Q9Y2W2 641 aaKnown RBP11.98□□□□□ -0.49
CNOT1-220ENST00000569916 LIPGQ9Y5X9 500 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.98□□□□□ -0.49
CNOT1-220ENST00000569916 ZNF407Q9C0G0 2248 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 NINQ8N4C6 2090 aa11.98□□□□□ -0.49
CNOT1-220ENST00000569916 ANKRD33BA6NCL7 494 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 CAPN14A8MX76 684 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 TP53I11O14683 189 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 PLOD3O60568 738 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 NME6O75414 186 aaPredicted RBP11.97□□□□□ -0.49
CNOT1-220ENST00000569916 PPM1BO75688 479 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 BCAS2O75934 225 aaPredicted RBP11.97□□□□□ -0.49
CNOT1-220ENST00000569916 PDE9AO76083 593 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 IGHG3P01860 377 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 JUNP05412 331 aaKnown RBP11.97□□□□□ -0.49
CNOT1-220ENST00000569916 CELA3AP09093 270 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 MPIP34949 423 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 PTGS2P35354 604 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 DCAF7P61962 342 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 KCNJ2P63252 427 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 RFTN2Q52LD8 501 aaPredicted RBP11.97□□□□□ -0.49
CNOT1-220ENST00000569916 XKR7Q5GH72 579 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 BICRALQ6AI39 1079 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 MTFR2Q6P444 385 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 ARHGAP11AQ6P4F7 1023 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 CD163Q86VB7 1156 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 DOLPP1Q86YN1 238 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 HOMEZQ8IX15 550 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 DDIASQ8IXT1 998 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 OR7G2Q8NG99 324 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 ITLN2Q8WWU7 325 aaPredicted RBP11.97□□□□□ -0.49
CNOT1-220ENST00000569916 DIO2Q92813 273 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 ZBTB9Q96C00 473 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 OMA1Q96E52 524 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 HSPBAP1Q96EW2 488 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 LCORQ96JN0 433 aaPredicted RBP11.97□□□□□ -0.49
CNOT1-220ENST00000569916 PHF12Q96QT6 1004 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 BBS4Q96RK4 519 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 SECISBP2Q96T21 854 aaKnown RBP11.97□□□□□ -0.49
CNOT1-220ENST00000569916 DOHHQ9BU89 302 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 CENPHQ9H3R5 247 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 ZDHHC2Q9UIJ5 367 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 BOKQ9UMX3 212 aaPredicted RBP11.97□□□□□ -0.49
CNOT1-220ENST00000569916 MEMO1Q9Y316 297 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 ACTL7BQ9Y614 415 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 NBPF19A0A087WUL8 3843 aa11.97□□□□□ -0.49
CNOT1-220ENST00000569916 FRG2CA6NGY1 282 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 PRRG2O14669 202 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 ADAM10O14672 748 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 TO15178 435 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 ACOX3O15254 700 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 TM9SF1O15321 606 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 TRIM3O75382 744 aaPredicted RBP11.96□□□□□ -0.49
CNOT1-220ENST00000569916 TPOP07202 933 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 ABCB1P08183 1280 aaPredicted RBP11.96□□□□□ -0.49
CNOT1-220ENST00000569916 RFPL3SP0C7P2 107 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 DHRS4L1P0CG22 281 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 ESRRAP11474 423 aaPredicted RBP11.96□□□□□ -0.49
CNOT1-220ENST00000569916 NAGAP17050 411 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 DRD5P21918 477 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 COL8A1P27658 744 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 NTSP30990 170 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 PPICP45877 212 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 NCBP2P52298 156 aaKnown RBP eCLIP11.96□□□□□ -0.496e-15■□□□□ 10.1
CNOT1-220ENST00000569916 MPP2Q14168 576 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 GALNTL6Q49A17 601 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 TBCELQ5QJ74 424 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 PAOXQ6QHF9 649 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 LRIG3Q6UXM1 1119 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 NCCRP1Q6ZVX7 275 aaPredicted RBP11.96□□□□□ -0.49
CNOT1-220ENST00000569916 NUDCD3Q8IVD9 361 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 HGDQ93099 445 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 NTNG2Q96CW9 530 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 PGM2Q96G03 612 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 ZNF764Q96H86 408 aaPredicted RBP11.96□□□□□ -0.49
CNOT1-220ENST00000569916 VSTM2LQ96N03 204 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 RILPQ96NA2 401 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 TSSK3Q96PN8 268 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 BTBD9Q96Q07 612 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 STMN4Q9H169 189 aaPredicted RBP11.96□□□□□ -0.49
CNOT1-220ENST00000569916 GLIPR2Q9H4G4 154 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 FOLH1BQ9HBA9 442 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 ZFP64Q9NPA5 681 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 GIMAP2Q9UG22 337 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 GPR55Q9Y2T6 319 aaPredicted RBP11.96□□□□□ -0.49
CNOT1-220ENST00000569916 TMED5Q9Y3A6 229 aa11.96□□□□□ -0.49
CNOT1-220ENST00000569916 DNAJC13O75165 2243 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 FREM3P0C091 2139 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 PHF3Q92576 2039 aaKnown RBP11.95□□□□□ -0.5
CNOT1-220ENST00000569916 A0A1B0GVC2 190 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 ATP6AP2A0A1C7CYW4 349 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 WDR91A4D1P6 747 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms