RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 LIME1Q9H400 295 aa12.65□□□□□ -0.38
GTF3C1-211ENST00000569653 ELOVL6Q9H5J4 265 aa12.65□□□□□ -0.38
GTF3C1-211ENST00000569653 PPCSQ9HAB8 311 aa12.65□□□□□ -0.38
GTF3C1-211ENST00000569653 GALNT9Q9HCQ5 603 aa12.65□□□□□ -0.38
GTF3C1-211ENST00000569653 EHD3Q9NZN3 535 aa12.65□□□□□ -0.38
GTF3C1-211ENST00000569653 KCNN3Q9UGI6 736 aa12.65□□□□□ -0.38
GTF3C1-211ENST00000569653 TRPS1Q9UHF7 1281 aa12.65□□□□□ -0.38
GTF3C1-211ENST00000569653 PLLPQ9Y342 182 aa12.65□□□□□ -0.38
GTF3C1-211ENST00000569653 VPS13CQ709C8 3753 aa12.65□□□□□ -0.38
GTF3C1-211ENST00000569653 C15orf38-AP3S2A0A0A6YYH1 394 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 C17orf51A8MQB3 221 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 GNB5O14775 395 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 UGT2B11O75310 529 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 ERAL1O75616 437 aaKnown RBP12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 PPM1BO75688 479 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 OTCP00480 354 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 BMP7P18075 431 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 CEACAM8P31997 349 aaPredicted RBP12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 EMDP50402 254 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 ZNF136P52737 540 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 NAGLUP54802 743 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 CLCQ05315 142 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 WIPI1Q5MNZ9 446 aaPredicted RBP12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 TBCELQ5QJ74 424 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 ZNF678Q5SXM1 525 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 VASNQ6EMK4 673 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 WDR93Q6P2C0 686 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 PLXDC2Q6UX71 529 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 SPNS3Q6ZMD2 512 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 WDR53Q7Z5U6 358 aaPredicted RBP12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 ZZZ3Q8IYH5 903 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 OR7G1Q8NGA0 311 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 ACMSDQ8TDX5 336 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 MZB1Q8WU39 189 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 KLHL29Q96CT2 875 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 OMA1Q96E52 524 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 TMEM41AQ96HV5 264 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 KCNA7Q96RP8 456 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 ZNF559Q9BR84 538 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 UGT2B28Q9BY64 529 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 ACPTQ9BZG2 426 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 BRINP2Q9C0B6 783 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 PRDM14Q9GZV8 571 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 BRF2Q9HAW0 419 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 EMCNQ9ULC0 261 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 PCDHGB3Q9Y5G1 929 aa12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 FLNAP21333 2647 aaKnown RBP12.64□□□□□ -0.39
GTF3C1-211ENST00000569653 C1orf226A1L170 272 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 TP53I11O14683 189 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 TRAPPC6AO75865 159 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 GABRA1P14867 456 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 CSNK2A2P19784 350 aaPredicted RBP12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 DNAJA1P31689 397 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 SLCO1A2P46721 670 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 HMGCS1Q01581 520 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 MYBPHQ13203 477 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 SLC25A35Q3KQZ1 300 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 ZNF628Q5EBL2 1059 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 C10orf62Q5T681 223 aaPredicted RBP12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 HLA-DQA1Q5Y7H0 255 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 TMEM198Q66K66 360 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 TIGD3Q6B0B8 471 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 ANGPTL8Q6UXH0 198 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 PAGE2Q7Z2X7 111 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 YRDCQ86U90 279 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 TMEM200AQ86VY9 491 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 LIX1Q8N485 282 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 WDSUB1Q8N9V3 476 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 MYRIPQ8NFW9 859 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 OR52R1Q8NGF1 315 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 C11orf24Q96F05 449 aaPredicted RBP12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 APIPQ96GX9 242 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 WDYHV1Q96HA8 205 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 ZNF382Q96SR6 550 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 SECISBP2Q96T21 854 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 PARD6BQ9BYG5 372 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 AHSPQ9NZD4 102 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 B4GALT7Q9UBV7 327 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 TBK1Q9UHD2 729 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 BCAP29Q9UHQ4 241 aa12.63□□□□□ -0.39
GTF3C1-211ENST00000569653 NIPBLQ6KC79 2804 aaeCLIP12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 GOLGA8RI6L899 631 aa12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 UBFD1O14562 309 aaKnown RBP12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 SNPHO15079 494 aa12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 CTAG2O75638 210 aa12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 SUPT7LO94864 414 aa12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 SNX4O95219 450 aa12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 EPPINO95925 133 aa12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 GSTA1P08263 222 aa12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 IL3P08700 152 aa12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 TAC1P20366 129 aa12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 ALDH9A1P49189 494 aa12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 FOXA1P55317 472 aa12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 CORO7P57737 925 aa12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 NHSL2Q5HYW2 709 aa12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 SCIMPQ6UWF3 145 aa12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 ARSKQ6UWY0 536 aa12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 NPSR1Q6W5P4 371 aa12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 FAM83FQ8NEG4 500 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 AENQ8WTP8 325 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms