RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-207ENST00000568782 PHF12Q96QT6 1004 aa9.54□□□□□ -0.88
UBR1-207ENST00000568782 CENPHQ9H3R5 247 aa9.54□□□□□ -0.88
UBR1-207ENST00000568782 C1orf109Q9NX04 203 aa9.54□□□□□ -0.88
UBR1-207ENST00000568782 MKS1Q9NXB0 559 aa9.54□□□□□ -0.88
UBR1-207ENST00000568782 KLRF1Q9NZS2 232 aa9.54□□□□□ -0.88
UBR1-207ENST00000568782 HEY2Q9UBP5 337 aa9.54□□□□□ -0.88
UBR1-207ENST00000568782 LGALS13Q9UHV8 139 aa9.54□□□□□ -0.88
UBR1-207ENST00000568782 MRTO4Q9UKD2 239 aaKnown RBP9.54□□□□□ -0.88
UBR1-207ENST00000568782 OR10H1Q9Y4A9 318 aa9.54□□□□□ -0.88
UBR1-207ENST00000568782 POLR3HQ9Y535 204 aaPredicted RBP9.54□□□□□ -0.88
UBR1-207ENST00000568782 CHCHD2Q9Y6H1 151 aaPredicted RBP9.54□□□□□ -0.88
UBR1-207ENST00000568782 NCOA6Q14686 2063 aaPredicted RBP9.54□□□□□ -0.88
UBR1-207ENST00000568782 SPTAN1Q13813 2472 aaKnown RBP9.54□□□□□ -0.88
UBR1-207ENST00000568782 ARHGAP21Q5T5U3 1957 aa9.54□□□□□ -0.88
UBR1-207ENST00000568782 A0A1W2PS29 197 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 PINLYPA6NC86 204 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 FRG2CA6NGY1 282 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 ESPNB1AK53 854 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 TMEM114B3SHH9 223 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 AQP7O14520 342 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 UBFD1O14562 309 aaKnown RBP9.53□□□□□ -0.88
UBR1-207ENST00000568782 CTIFO43310 598 aaKnown RBP9.53□□□□□ -0.88
UBR1-207ENST00000568782 WDR1O75083 606 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 SPAG7O75391 227 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 WISP2O76076 250 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 GLSO94925 669 aaPredicted RBP9.53□□□□□ -0.88
UBR1-207ENST00000568782 IGHG3P01860 377 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 COX6B1P14854 86 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 PCSK2P16519 638 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 GPC1P35052 558 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 ASMTP46597 345 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 NCBP2P52298 156 aaKnown RBP eCLIP9.53□□□□□ -0.88
UBR1-207ENST00000568782 FOXA1P55317 472 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 RAE1P78406 368 aaKnown RBP9.53□□□□□ -0.88
UBR1-207ENST00000568782 MRPS35P82673 323 aaKnown RBP9.53□□□□□ -0.88
UBR1-207ENST00000568782 SNTA1Q13424 505 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 PCLAFQ15004 111 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 NNATQ16517 81 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 TRMT12Q53H54 448 aaKnown RBP9.53□□□□□ -0.88
UBR1-207ENST00000568782 ZNF787Q6DD87 383 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 HIST2H2BCQ6DN03 193 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 CLEC6AQ6EIG7 209 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 SLC30A6Q6NXT4 461 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 FAM180BQ6P0A1 224 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 TRILQ7L0X0 811 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 TICAM1Q8IUC6 712 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 PRR22Q8IZ63 422 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 MMP21Q8N119 569 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 OR1J4Q8NGS1 313 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 ZFP28Q8NHY6 868 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 SPPL2AQ8TCT8 520 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 TCP10LQ8TDR4 215 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 AENQ8WTP8 325 aaKnown RBP9.53□□□□□ -0.88
UBR1-207ENST00000568782 KAT2AQ92830 837 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 MARVELD3Q96A59 401 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 CTHRC1Q96CG8 243 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 OMA1Q96E52 524 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 ZNF681Q96N22 645 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 RILPQ96NA2 401 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 CCT7Q99832 543 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 GATA5Q9BWX5 397 aaPredicted RBP9.53□□□□□ -0.88
UBR1-207ENST00000568782 ITPAQ9BY32 194 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 PARD6BQ9BYG5 372 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 NXF5Q9H1B4 397 aaKnown RBP9.53□□□□□ -0.88
UBR1-207ENST00000568782 C3orf14Q9HBI5 128 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 LRTM1Q9HBL6 345 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 MYNNQ9NPC7 610 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 PLSCR2Q9NRY7 297 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.53□□□□□ -0.88
UBR1-207ENST00000568782 TMED5Q9Y3A6 229 aa9.53□□□□□ -0.88
UBR1-207ENST00000568782 V9GYY5 206 aaPredicted RBP9.53□□□□□ -0.88
UBR1-207ENST00000568782 C15orf38-AP3S2A0A0A6YYH1 394 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 A0A0G2JMM0 328 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 A0A1B0GVC2 190 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 A0A1W2PPB8 328 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 A0A1W2PRS3 328 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 KIR3DP1A8MWS1 328 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 ZNHIT1O43257 154 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 PLOD3O60568 738 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 ERN1O75460 977 aaKnown RBP9.52□□□□□ -0.89
UBR1-207ENST00000568782 CLPSP04118 112 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 JUNP05412 331 aaKnown RBP9.52□□□□□ -0.89
UBR1-207ENST00000568782 ABCB1P08183 1280 aaPredicted RBP9.52□□□□□ -0.89
UBR1-207ENST00000568782 FGF4P08620 206 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 S1PR1P21453 382 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 ACVR2AP27037 513 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 ALDH3A1P30838 453 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 CHRNB4P30926 498 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 PTGER4P35408 488 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 RPL3P39023 403 aaKnown RBP9.52□□□□□ -0.89
UBR1-207ENST00000568782 CASP3P42574 277 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 CLK3P49761 638 aaKnown RBP9.52□□□□□ -0.89
UBR1-207ENST00000568782 PSMD4P55036 377 aaKnown RBP9.52□□□□□ -0.89
UBR1-207ENST00000568782 FOXO1Q12778 655 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 EFR3AQ14156 821 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 LTB4RQ15722 352 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 ZNF630Q2M218 657 aaPredicted RBP9.52□□□□□ -0.89
UBR1-207ENST00000568782 GALNTL6Q49A17 601 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 ZNF628Q5EBL2 1059 aa9.52□□□□□ -0.89
UBR1-207ENST00000568782 SH2D4BQ5SQS7 431 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms