RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 POU2F1P14859 743 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 FOLR1P15328 257 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 MAOAP21397 527 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 PIGAP37287 484 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 XCR1P46094 333 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 PGDP52209 483 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 KCNC4Q03721 635 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 FAM53BQ14153 422 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 ELOAQ14241 798 aaKnown RBP6.61□□□□□ -1.35
SMG1-215ENST00000568239 PUM1Q14671 1186 aaKnown RBP eCLIP6.61□□□□□ -1.35
SMG1-215ENST00000568239 FAM214AQ32MH5 1076 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 MINDY4Q4G0A6 757 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 IQCCQ4KMZ1 466 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 ZNF628Q5EBL2 1059 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 CCNJQ5T5M9 372 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 MFSD12Q6NUT3 480 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 TSEN54Q7Z6J9 526 aaKnown RBP6.61□□□□□ -1.35
SMG1-215ENST00000568239 CYP4Z1Q86W10 505 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 RBM45Q8IUH3 476 aaKnown RBP6.61□□□□□ -1.35
SMG1-215ENST00000568239 GPR32P1Q8NGA4 272 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 SAP25Q8TEE9 199 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 PHF10Q8WUB8 498 aaKnown RBP6.61□□□□□ -1.35
SMG1-215ENST00000568239 RASSF5Q8WWW0 418 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 ANKRD9Q96BM1 317 aaPredicted RBP6.61□□□□□ -1.35
SMG1-215ENST00000568239 ZG16BQ96DA0 208 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 GIMAP5Q96F15 307 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 RMND5BQ96G75 393 aaPredicted RBP6.61□□□□□ -1.35
SMG1-215ENST00000568239 SLC35A4Q96G79 324 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 CNPPD1Q9BV87 410 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 RAB33BQ9H082 229 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 SMOC1Q9H4F8 434 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 KRT84Q9NSB2 600 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 CUTCQ9NTM9 273 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 PTGFRNQ9P2B2 879 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 SLC13A4Q9UKG4 626 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 MYRFQ9Y2G1 1151 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 TMEM184BQ9Y519 407 aaPredicted RBP6.61□□□□□ -1.35
SMG1-215ENST00000568239 FCMRO60667 390 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 GADD45GO95257 159 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 ATP1B1P05026 303 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 TNNI3P19429 210 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 GABRA4P48169 554 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 GSSP48637 474 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 DAPP51397 102 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 PDX1P52945 283 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 DAB2P98082 770 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 NR0B2Q15466 257 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 GPR68Q15743 365 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 DUSP5Q16690 384 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 ZNF311Q5JNZ3 666 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 FGD3Q5JSP0 725 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 C1orf189Q5VU69 101 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 GARNL3Q5VVW2 1013 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 ZC3H14Q6PJT7 736 aaKnown RBP6.61□□□□□ -1.35
SMG1-215ENST00000568239 PRSS58Q8IYP2 241 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 LGI4Q8N135 537 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 OR2L13Q8N349 312 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 ARHGEF39Q8N4T4 335 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 OR4C6Q8NH72 309 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 BBS10Q8TAM1 723 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 GPR151Q8TDV0 419 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 PIK3R3Q92569 461 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 RIT1Q92963 219 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 CLIP3Q96DZ5 547 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 ZNF354BQ96LW1 612 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 PIP5K1AQ99755 562 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 WFDC6Q9BQY6 131 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 NDC1Q9BTX1 674 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 SPATA5L1Q9BVQ7 753 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 ALOXE3Q9BYJ1 711 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 DNAAF2Q9NVR5 837 aaKnown RBP6.61□□□□□ -1.35
SMG1-215ENST00000568239 FAM118AQ9NWS6 357 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 MAT2BQ9NZL9 334 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 PDP2Q9P2J9 529 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 LYVE1Q9Y5Y7 322 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 ENPP4Q9Y6X5 453 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 WDFY3Q8IZQ1 3526 aa6.61□□□□□ -1.35
SMG1-215ENST00000568239 LOC100130705A0A1B0GUX0 176 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 A8MVJ9 347 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 FRS3O43559 492 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 ALPPP05187 535 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 RPLP0P05388 317 aaKnown RBP6.6□□□□□ -1.35
SMG1-215ENST00000568239 CD247P20963 164 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 FUT4P22083 530 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 MYF6P23409 242 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 KCNJ5P48544 419 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 RNF144AP50876 292 aaPredicted RBP6.6□□□□□ -1.35
SMG1-215ENST00000568239 ADARB1P78563 741 aaKnown RBP6.6□□□□□ -1.35
SMG1-215ENST00000568239 EPS8Q12929 822 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 EXOC3L2Q2M3D2 409 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 PRICKLE4Q2TBC4 344 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 PERM1Q5SV97 790 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 TTC23Q5W5X9 447 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 CDC73Q6P1J9 531 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 DGAT2L6Q6ZPD8 337 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 VRK2Q86Y07 508 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 LACC1Q8IV20 430 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 GALNT12Q8IXK2 581 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 VWA5B2Q8N398 1253 aa6.6□□□□□ -1.35
SMG1-215ENST00000568239 COX18Q8N8Q8 333 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms