RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 RASA2Q15283 850 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 NRF1Q16656 503 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 ELOA3BQ3SY89 546 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 FNDC7Q5VTL7 733 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 FAM166AQ6J272 317 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 ZNF549Q6P9A3 640 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 PIWIL4Q7Z3Z4 852 aaKnown RBP8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 CROCCP2Q86T23 111 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 C9orf40Q8IXQ3 194 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 KLHDC8AQ8IYD2 350 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 MREGQ8N565 214 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 NKAPQ8N5F7 415 aaKnown RBP8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 ANKRD53Q8N9V6 530 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 ELOA3Q8NG57 546 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 TTLQ8NG68 377 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 OR14L1PQ8NHC6 308 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 SPPL2AQ8TCT8 520 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 AENQ8WTP8 325 aaKnown RBP8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 NEIL2Q969S2 332 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 RHBDF1Q96CC6 855 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 C11orf24Q96F05 449 aaPredicted RBP8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 TMEM41AQ96HV5 264 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 ADAD1Q96M93 576 aaKnown RBP8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 DGAT2Q96PD7 388 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 SERINC2Q96SA4 455 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 GPR22Q99680 433 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 NTMT1Q9BV86 223 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 TRIM54Q9BYV2 358 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 ROPN1BQ9BZX4 212 aaPredicted RBP8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 ROPN1Q9HAT0 212 aaPredicted RBP8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 SMYD2Q9NRG4 433 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 TRMT6Q9UJA5 497 aaKnown RBP8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 DAPP1Q9UN19 280 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 MAGED1Q9Y5V3 778 aaPredicted RBP8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 SVEP1Q4LDE5 3571 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 A0A096LNT2 108 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 A0A0G2JN53 185 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 EXOC1LA0A1B0GW35 172 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 FAM95CA0A1B0GW59 222 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 CCDC151A5D8V7 595 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 LRIT2A6NDA9 550 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 SLC22A20A6NK97 555 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 C4orf51C9J302 202 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 CDC7O00311 574 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 GNB5O14775 395 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 LDB3O75112 727 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 NDUFS7O75251 213 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 CBR3O75828 277 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 CGAP01215 116 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 IGKV3-11P04433 115 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 STMN1P16949 149 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 IGFBP5P24593 272 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 PTPN6P29350 595 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 CRABP2P29373 138 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 CASP3P42574 277 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 STT3AP46977 705 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 NUDT6P53370 316 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 PLA2G16P53816 162 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 FBXW4P57775 412 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 LSM11P83369 360 aaKnown RBP eCLIP8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 REEP5Q00765 189 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 SP140Q13342 867 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 PDAP1Q13442 181 aaKnown RBP8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 RPS6KA2Q15349 733 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 PDCD2Q16342 344 aaPredicted RBP8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 EXOC3L2Q2M3D2 409 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 BICRALQ6AI39 1079 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 TRIM40Q6P9F5 258 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 ABHD17CQ6PCB6 329 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 NXPE4Q6UWF7 544 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 SBSNQ6UWP8 590 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 DNAJC14Q6Y2X3 702 aaPredicted RBP8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 EML6Q6ZMW3 1958 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 MBOAT1Q6ZNC8 495 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 IL17RELQ6ZVW7 336 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 TDRPQ86YL5 185 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 WFDC8Q8IUA0 241 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 NINQ8N4C6 2090 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 OR56A3Q8NH54 315 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 LILRB1Q8NHL6 650 aaPredicted RBP8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 UBLCP1Q8WVY7 318 aaPredicted RBP8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 PROX1Q92786 737 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 TP53INP1Q96A56 240 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 CTHRC1Q96CG8 243 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 MS4A6EQ96DS6 147 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 MTBPQ96DY7 904 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 DTNBP1Q96EV8 351 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 LCORQ96JN0 433 aaPredicted RBP8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 OR4K3Q96R72 315 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 GAL3ST4Q96RP7 486 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 GPR21Q99679 349 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 TACO1Q9BSH4 297 aaKnown RBP8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 G6PC3Q9BUM1 346 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 GRIP2Q9C0E4 1043 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 PELI2Q9HAT8 420 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 NGBQ9NPG2 151 aa8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 RRAGDQ9NQL2 400 aaPredicted RBP8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 TEX10Q9NXF1 929 aaPredicted RBP8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 GDF2Q9UK05 429 aaPredicted RBP8.16□□□□□ -1.1
VPS9D1-205ENST00000565452 ADAMTS6Q9UKP5 1117 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms