RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 OR10A5Q9H207 317 aa24.07■■□□□ 1.44
NME3-208ENST00000565379 TAS2R9Q9NYW1 312 aa24.07■■□□□ 1.44
NME3-208ENST00000565379 TEKT2Q9UIF3 430 aa24.07■■□□□ 1.44
NME3-208ENST00000565379 C19orf53Q9UNZ5 99 aaPredicted RBP24.07■■□□□ 1.44
NME3-208ENST00000565379 PCDHGB7Q9Y5F8 929 aa24.07■■□□□ 1.44
NME3-208ENST00000565379 TRBV11-1A0A0K0K1C0 115 aa24.06■■□□□ 1.44
NME3-208ENST00000565379 CCDC154A6NI56 674 aa24.06■■□□□ 1.44
NME3-208ENST00000565379 C6orf47O95873 294 aa24.06■■□□□ 1.44
NME3-208ENST00000565379 GNLYP22749 145 aa24.06■■□□□ 1.44
NME3-208ENST00000565379 DGKQP52824 942 aa24.06■■□□□ 1.44
NME3-208ENST00000565379 SLC37A1P57057 533 aa24.06■■□□□ 1.44
NME3-208ENST00000565379 PRR5P85299 388 aa24.06■■□□□ 1.44
NME3-208ENST00000565379 MAPRE2Q15555 327 aa24.06■■□□□ 1.44
NME3-208ENST00000565379 PLEKHN1Q494U1 663 aaPredicted RBP24.06■■□□□ 1.44
NME3-208ENST00000565379 TRMT12Q53H54 448 aaKnown RBP24.06■■□□□ 1.44
NME3-208ENST00000565379 H3F3CQ6NXT2 135 aa24.06■■□□□ 1.44
NME3-208ENST00000565379 TMEM107Q6UX40 140 aa24.06■■□□□ 1.44
NME3-208ENST00000565379 SLC29A4Q7RTT9 530 aa24.06■■□□□ 1.44
NME3-208ENST00000565379 FUNDC1Q8IVP5 155 aa24.06■■□□□ 1.44
NME3-208ENST00000565379 NUBPLQ8TB37 319 aa24.06■■□□□ 1.44
NME3-208ENST00000565379 KAT2AQ92830 837 aa24.06■■□□□ 1.44
NME3-208ENST00000565379 SPDL1Q96EA4 605 aa24.06■■□□□ 1.44
NME3-208ENST00000565379 DDX18Q9NVP1 670 aaKnown RBP24.06■■□□□ 1.44
NME3-208ENST00000565379 NTMQ9P121 344 aa24.06■■□□□ 1.44
NME3-208ENST00000565379 CSAG2Q9Y5P2 127 aa24.06■■□□□ 1.44
NME3-208ENST00000565379 ITGAMP11215 1152 aa24.05■■□□□ 1.44
NME3-208ENST00000565379 MC3RP41968 323 aa24.05■■□□□ 1.44
NME3-208ENST00000565379 PHC1P78364 1004 aa24.05■■□□□ 1.44
NME3-208ENST00000565379 MRPS35P82673 323 aaKnown RBP24.05■■□□□ 1.44
NME3-208ENST00000565379 INPP5JQ15735 1006 aaPredicted RBP24.05■■□□□ 1.44
NME3-208ENST00000565379 MAPKAPK3Q16644 382 aa24.05■■□□□ 1.44
NME3-208ENST00000565379 CRB2Q5IJ48 1285 aa24.05■■□□□ 1.44
NME3-208ENST00000565379 FHL5Q5TD97 284 aa24.05■■□□□ 1.44
NME3-208ENST00000565379 BHLHB9Q6PI77 547 aa24.05■■□□□ 1.44
NME3-208ENST00000565379 ZNF615Q8N8J6 731 aa24.05■■□□□ 1.44
NME3-208ENST00000565379 OR7G2Q8NG99 324 aa24.05■■□□□ 1.44
NME3-208ENST00000565379 GOT1L1Q8NHS2 421 aaPredicted RBP24.05■■□□□ 1.44
NME3-208ENST00000565379 ITCHQ96J02 903 aa24.05■■□□□ 1.44
NME3-208ENST00000565379 NMUR2Q9GZQ4 415 aa24.05■■□□□ 1.44
NME3-208ENST00000565379 BCAP29Q9UHQ4 241 aa24.05■■□□□ 1.44
NME3-208ENST00000565379 C9JVG2 144 aa24.04■■□□□ 1.44
NME3-208ENST00000565379 HRKO00198 91 aa24.04■■□□□ 1.44
NME3-208ENST00000565379 EMC8O43402 210 aa24.04■■□□□ 1.44
NME3-208ENST00000565379 DCTN3O75935 186 aa24.04■■□□□ 1.44
NME3-208ENST00000565379 CBX7O95931 251 aa24.04■■□□□ 1.44
NME3-208ENST00000565379 ALPPP05187 535 aa24.04■■□□□ 1.44
NME3-208ENST00000565379 SSTR4P31391 388 aa24.04■■□□□ 1.44
NME3-208ENST00000565379 DCAF7P61962 342 aa24.04■■□□□ 1.44
NME3-208ENST00000565379 RNF4P78317 190 aa24.04■■□□□ 1.44
NME3-208ENST00000565379 TIGD2Q4W5G0 525 aa24.04■■□□□ 1.44
NME3-208ENST00000565379 AGAP7PQ5VUJ5 663 aa24.04■■□□□ 1.44
NME3-208ENST00000565379 ARMC10Q8N2F6 343 aa24.04■■□□□ 1.44
NME3-208ENST00000565379 TRIML2Q8N7C3 387 aa24.04■■□□□ 1.44
NME3-208ENST00000565379 C17orf47Q8NEP4 570 aa24.04■■□□□ 1.44
NME3-208ENST00000565379 OR52R1Q8NGF1 315 aa24.04■■□□□ 1.44
NME3-208ENST00000565379 OR4A15Q8NGL6 344 aa24.04■■□□□ 1.44
NME3-208ENST00000565379 SFXN5Q8TD22 340 aa24.04■■□□□ 1.44
NME3-208ENST00000565379 BRIX1Q8TDN6 353 aaKnown RBP24.04■■□□□ 1.44
NME3-208ENST00000565379 PNPLA2Q96AD5 504 aa24.04■■□□□ 1.44
NME3-208ENST00000565379 ZNF354BQ96LW1 612 aa24.04■■□□□ 1.44
NME3-208ENST00000565379 AGAP4Q96P64 663 aa24.04■■□□□ 1.44
NME3-208ENST00000565379 ZNF223Q9UK11 482 aaPredicted RBP24.04■■□□□ 1.44
NME3-208ENST00000565379 CAPN7Q9Y6W3 813 aa24.04■■□□□ 1.44
NME3-208ENST00000565379 SPTBN1Q01082 2364 aaKnown RBP24.03■■□□□ 1.44
NME3-208ENST00000565379 A0A1W2PP18 115 aa24.03■■□□□ 1.44
NME3-208ENST00000565379 TTC36A6NLP5 189 aa24.03■■□□□ 1.44
NME3-208ENST00000565379 UPK1AO00322 258 aa24.03■■□□□ 1.44
NME3-208ENST00000565379 NR5A2O00482 541 aa24.03■■□□□ 1.44
NME3-208ENST00000565379 FCHO1O14526 889 aa24.03■■□□□ 1.44
NME3-208ENST00000565379 CLPSP04118 112 aa24.03■■□□□ 1.44
NME3-208ENST00000565379 CELA2AP08217 269 aa24.03■■□□□ 1.44
NME3-208ENST00000565379 SNRPB2P08579 225 aaKnown RBP24.03■■□□□ 1.44
NME3-208ENST00000565379 SOX18P35713 384 aa24.03■■□□□ 1.44
NME3-208ENST00000565379 CDK9P50750 372 aaKnown RBP24.03■■□□□ 1.44
NME3-208ENST00000565379 HBA1P69905 142 aa24.03■■□□□ 1.44
NME3-208ENST00000565379 PSPHP78330 225 aa24.03■■□□□ 1.44
NME3-208ENST00000565379 KLF10Q13118 480 aa24.03■■□□□ 1.44
NME3-208ENST00000565379 HLA-DQA1Q5Y7H0 255 aa24.03■■□□□ 1.44
NME3-208ENST00000565379 MTDHQ86UE4 582 aaKnown RBP24.03■■□□□ 1.44
NME3-208ENST00000565379 ZNF321PQ8N8H1 164 aa24.03■■□□□ 1.44
NME3-208ENST00000565379 OR56A1Q8NGH5 318 aa24.03■■□□□ 1.44
NME3-208ENST00000565379 DNAJB8Q8NHS0 232 aa24.03■■□□□ 1.44
NME3-208ENST00000565379 PSMF1Q92530 271 aa24.03■■□□□ 1.44
NME3-208ENST00000565379 PANX1Q96RD7 426 aa24.03■■□□□ 1.44
NME3-208ENST00000565379 SIRT3Q9NTG7 399 aaPredicted RBP24.03■■□□□ 1.44
NME3-208ENST00000565379 VPS4AQ9UN37 437 aa24.03■■□□□ 1.44
NME3-208ENST00000565379 ESPL1Q14674 2120 aa24.02■■□□□ 1.44
NME3-208ENST00000565379 NDUFAB1O14561 156 aa24.02■■□□□ 1.44
NME3-208ENST00000565379 EFNA1P20827 205 aaPredicted RBP24.02■■□□□ 1.44
NME3-208ENST00000565379 PTGER1P34995 402 aa24.02■■□□□ 1.44
NME3-208ENST00000565379 TRPC1P48995 793 aa24.02■■□□□ 1.44
NME3-208ENST00000565379 MEP1AQ16819 746 aa24.02■■□□□ 1.44
NME3-208ENST00000565379 SPDYE7PQ495Y7 208 aa24.02■■□□□ 1.44
NME3-208ENST00000565379 ZCCHC12Q6PEW1 402 aa24.02■■□□□ 1.44
NME3-208ENST00000565379 ANKRD46Q86W74 232 aa24.02■■□□□ 1.44
NME3-208ENST00000565379 RPS19BP1Q86WX3 136 aaKnown RBP24.02■■□□□ 1.44
NME3-208ENST00000565379 CLECL1Q8IZS7 167 aa24.02■■□□□ 1.44
NME3-208ENST00000565379 KIF2BQ8N4N8 673 aa24.02■■□□□ 1.44
NME3-208ENST00000565379 CCDC197Q8NCU1 140 aa24.02■■□□□ 1.44
NME3-208ENST00000565379 GALNT11Q8NCW6 608 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms