RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 SLC15A3Q8IY34 581 aa12.04□□□□□ -0.48
SPG7-209ENST00000564047 CLEC4FQ8N1N0 589 aa12.04□□□□□ -0.48
SPG7-209ENST00000564047 VWA5B2Q8N398 1253 aa12.04□□□□□ -0.48
SPG7-209ENST00000564047 ZNF843Q8N446 348 aa12.04□□□□□ -0.48
SPG7-209ENST00000564047 OR7G2Q8NG99 324 aa12.04□□□□□ -0.48
SPG7-209ENST00000564047 OR5AK3PQ8NH89 298 aa12.04□□□□□ -0.48
SPG7-209ENST00000564047 OR14A16Q8NHC5 309 aa12.04□□□□□ -0.48
SPG7-209ENST00000564047 PTPMT1Q8WUK0 201 aaPredicted RBP12.04□□□□□ -0.48
SPG7-209ENST00000564047 DAZLQ92904 295 aaKnown RBP12.04□□□□□ -0.48
SPG7-209ENST00000564047 TMEM125Q96AQ2 219 aa12.04□□□□□ -0.48
SPG7-209ENST00000564047 NACC2Q96BF6 587 aa12.04□□□□□ -0.48
SPG7-209ENST00000564047 NEURL3Q96EH8 262 aa12.04□□□□□ -0.48
SPG7-209ENST00000564047 AURKBQ96GD4 344 aaPredicted RBP12.04□□□□□ -0.48
SPG7-209ENST00000564047 RAD21L1Q9H4I0 556 aa12.04□□□□□ -0.48
SPG7-209ENST00000564047 DDX18Q9NVP1 670 aaKnown RBP12.04□□□□□ -0.48
SPG7-209ENST00000564047 CMTM6Q9NX76 183 aa12.04□□□□□ -0.48
SPG7-209ENST00000564047 TMEM181Q9P2C4 612 aa12.04□□□□□ -0.48
SPG7-209ENST00000564047 ABCD2Q9UBJ2 740 aa12.04□□□□□ -0.48
SPG7-209ENST00000564047 KCND3Q9UK17 655 aa12.04□□□□□ -0.48
SPG7-209ENST00000564047 C19orf53Q9UNZ5 99 aaPredicted RBP12.04□□□□□ -0.48
SPG7-209ENST00000564047 CORO2BQ9UQ03 480 aa12.04□□□□□ -0.48
SPG7-209ENST00000564047 PCDHGA6Q9Y5G7 932 aa12.04□□□□□ -0.48
SPG7-209ENST00000564047 CLCA3PQ9Y6N3 262 aa12.04□□□□□ -0.48
SPG7-209ENST00000564047 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.04□□□□□ -0.48
SPG7-209ENST00000564047 NUP210LQ5VU65 1888 aa12.04□□□□□ -0.48
SPG7-209ENST00000564047 FER1L5A0AVI2 2057 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 LOC102723996A0A087X1L8 192 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 H0Y3Z8 333 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 COQ9O75208 318 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 BCAS2O75934 225 aaPredicted RBP12.03□□□□□ -0.48
SPG7-209ENST00000564047 ACADSP16219 412 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 GPX2P18283 190 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 S1PR1P21453 382 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 MMP11P24347 488 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 CHI3L1P36222 383 aaPredicted RBP12.03□□□□□ -0.48
SPG7-209ENST00000564047 PTDSS1P48651 473 aaKnown RBP12.03□□□□□ -0.48
SPG7-209ENST00000564047 SLC7A2P52569 658 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 EEFSECP57772 596 aaKnown RBP12.03□□□□□ -0.48
SPG7-209ENST00000564047 MTPNP58546 118 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 AP2B1P63010 937 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 FUT7Q11130 342 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 ZNF267Q14586 743 aaPredicted RBP12.03□□□□□ -0.48
SPG7-209ENST00000564047 SSPNQ14714 243 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 TBC1D25Q3MII6 688 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 SPATS1Q496A3 300 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 TRMT12Q53H54 448 aaKnown RBP12.03□□□□□ -0.48
SPG7-209ENST00000564047 SFT2D3Q587I9 215 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 RABL3Q5HYI8 236 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 C1orf146Q5VVC0 180 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 FAAH2Q6GMR7 532 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 GPR155Q7Z3F1 870 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 C6orf120Q7Z4R8 191 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 CPEB2Q7Z5Q1 589 aaKnown RBP12.03□□□□□ -0.48
SPG7-209ENST00000564047 IL22RA1Q8N6P7 574 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 MORN4Q8NDC4 146 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 NUP43Q8NFH3 380 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 OR7G1Q8NGA0 311 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 OR52N2Q8NGI0 321 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 FBXL20Q96IG2 436 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 MAGED4Q96JG8 741 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 ART5Q96L15 291 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 MS4A4EQ96PG1 132 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 CDRT15Q96T59 188 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 THUMPD3Q9BV44 507 aaKnown RBP12.03□□□□□ -0.48
SPG7-209ENST00000564047 IKZF5Q9H5V7 419 aa12.03□□□□□ -0.48
SPG7-209ENST00000564047 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 A0A1W2PQ72 361 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 SAGE2PA6NJ88 616 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 A8MUA0 341 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 NME4O00746 187 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 DNAJA2O60884 412 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 CBX7O95931 251 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 C1QCP02747 245 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 ATP6V1C1P21283 382 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 F8A1P23610 371 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 PGDP52209 483 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 MVDP53602 400 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 PRKAG1P54619 331 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 TXNL4AP83876 142 aaKnown RBP12.02□□□□□ -0.49
SPG7-209ENST00000564047 FADDQ13158 208 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 TP53BP2Q13625 1128 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 SELPLGQ14242 412 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 RGNQ15493 299 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 TAF11Q15544 211 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 SAMD4BQ5PRF9 694 aaKnown RBP12.02□□□□□ -0.49
SPG7-209ENST00000564047 LRRC74BQ6ZQY2 392 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 SZRD1Q7Z422 152 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 FBXW8Q8N3Y1 598 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 MIPOL1Q8TD10 442 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 DOK4Q8TEW6 326 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 KIAA1143Q96AT1 154 aaPredicted RBP12.02□□□□□ -0.49
SPG7-209ENST00000564047 GIMAP5Q96F15 307 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 SENP5Q96HI0 755 aaPredicted RBP12.02□□□□□ -0.49
SPG7-209ENST00000564047 SLC35G5Q96KT7 338 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 LPAR4Q99677 370 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 WDR77Q9BQA1 342 aaPredicted RBP12.02□□□□□ -0.49
SPG7-209ENST00000564047 CNPPD1Q9BV87 410 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 TRIM8Q9BZR9 551 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 PRORYQ9H606 182 aa12.02□□□□□ -0.49
SPG7-209ENST00000564047 KAT8Q9H7Z6 458 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms