RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 VIMP08670 466 aaKnown RBP14.49□□□□□ -0.09
USB1-208ENST00000563207 TROVE2P10155 538 aaKnown RBP eCLIP14.49□□□□□ -0.09
USB1-208ENST00000563207 G6PDP11413 515 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 IDO1P14902 403 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 NME2P22392 152 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 PTGER1P34995 402 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 CYB561P49447 251 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 CLCN2P51788 898 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 GPR143P51810 404 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 AQP5P55064 265 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 MAP4K2Q12851 820 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 ART3Q13508 389 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 PTGR1Q14914 329 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 GSTA3Q16772 222 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 NXNQ6DKJ4 435 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 MAVSQ7Z434 540 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 SPPL2CQ8IUH8 684 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 MCEMP1Q8IX19 187 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 LGI4Q8N135 537 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 ZNF321PQ8N8H1 164 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 TMEM178AQ8NBL3 297 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 OR8K3Q8NH51 312 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 NCLNQ969V3 563 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 EXOSC8Q96B26 276 aaKnown RBP14.49□□□□□ -0.09
USB1-208ENST00000563207 PPCDCQ96CD2 204 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 ERP27Q96DN0 273 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 FBXL20Q96IG2 436 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 PHF12Q96QT6 1004 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 BBS4Q96RK4 519 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 DEFB126Q9BYW3 111 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 CXorf21Q9HAI6 301 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 TCF7L2Q9NQB0 619 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 COPS7AQ9UBW8 275 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 HRH3Q9Y5N1 445 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 PCNX1Q96RV3 2341 aa14.49□□□□□ -0.09
USB1-208ENST00000563207 MYO1GB0I1T2 1018 aa14.48□□□□□ -0.09
USB1-208ENST00000563207 SCAMP2O15127 329 aaKnown RBP14.48□□□□□ -0.09
USB1-208ENST00000563207 IFI6P09912 130 aa14.48□□□□□ -0.09
USB1-208ENST00000563207 HTR1EP28566 365 aa14.48□□□□□ -0.09
USB1-208ENST00000563207 NTSP30990 170 aa14.48□□□□□ -0.09
USB1-208ENST00000563207 TRHRP34981 398 aaPredicted RBP14.48□□□□□ -0.09
USB1-208ENST00000563207 FEN1P39748 380 aaKnown RBP14.48□□□□□ -0.09
USB1-208ENST00000563207 IDH3AP50213 366 aa14.48□□□□□ -0.09
USB1-208ENST00000563207 HLCSP50747 726 aa14.48□□□□□ -0.09
USB1-208ENST00000563207 CLNS1AP54105 237 aaKnown RBP14.48□□□□□ -0.09
USB1-208ENST00000563207 DIO3P55073 304 aa14.48□□□□□ -0.09
USB1-208ENST00000563207 GPR85P60893 370 aa14.48□□□□□ -0.09
USB1-208ENST00000563207 RBPJQ06330 500 aa14.48□□□□□ -0.09
USB1-208ENST00000563207 DPY19L1Q2PZI1 675 aa14.48□□□□□ -0.09
USB1-208ENST00000563207 LSM12Q3MHD2 195 aaKnown RBP14.48□□□□□ -0.09
USB1-208ENST00000563207 Q6ZPB1 254 aaPredicted RBP14.48□□□□□ -0.09
USB1-208ENST00000563207 CAMKMTQ7Z624 323 aa14.48□□□□□ -0.09
USB1-208ENST00000563207 SULF2Q8IWU5 870 aa14.48□□□□□ -0.09
USB1-208ENST00000563207 GALNT12Q8IXK2 581 aa14.48□□□□□ -0.09
USB1-208ENST00000563207 RIMKLAQ8IXN7 391 aa14.48□□□□□ -0.09
USB1-208ENST00000563207 SLC34A3Q8N130 599 aa14.48□□□□□ -0.09
USB1-208ENST00000563207 ARMC10Q8N2F6 343 aa14.48□□□□□ -0.09
USB1-208ENST00000563207 OR7G1Q8NGA0 311 aa14.48□□□□□ -0.09
USB1-208ENST00000563207 CLHC1Q8NHS4 586 aa14.48□□□□□ -0.09
USB1-208ENST00000563207 SLC2A12Q8TD20 617 aa14.48□□□□□ -0.09
USB1-208ENST00000563207 ZNF675Q8TD23 568 aa14.48□□□□□ -0.09
USB1-208ENST00000563207 PPWD1Q96BP3 646 aaKnown RBP14.48□□□□□ -0.09
USB1-208ENST00000563207 COQ8BQ96D53 544 aa14.48□□□□□ -0.09
USB1-208ENST00000563207 SENP5Q96HI0 755 aaPredicted RBP14.48□□□□□ -0.09
USB1-208ENST00000563207 DPY30Q9C005 99 aa14.48□□□□□ -0.09
USB1-208ENST00000563207 BRINP2Q9C0B6 783 aa14.48□□□□□ -0.09
USB1-208ENST00000563207 TRIM45Q9H8W5 580 aaPredicted RBP14.48□□□□□ -0.09
USB1-208ENST00000563207 DEPPQ9NTK1 212 aa14.48□□□□□ -0.09
USB1-208ENST00000563207 ACSS1Q9NUB1 689 aaPredicted RBP14.48□□□□□ -0.09
USB1-208ENST00000563207 AIG1Q9NVV5 245 aa14.48□□□□□ -0.09
USB1-208ENST00000563207 SH3BP4Q9P0V3 963 aa14.48□□□□□ -0.09
USB1-208ENST00000563207 SUCOQ9UBS9 1254 aaKnown RBP14.48□□□□□ -0.09
USB1-208ENST00000563207 PINLYPA6NC86 204 aa14.47□□□□□ -0.09
USB1-208ENST00000563207 ADAM10O14672 748 aa14.47□□□□□ -0.09
USB1-208ENST00000563207 UBDO15205 165 aa14.47□□□□□ -0.09
USB1-208ENST00000563207 AKAP10O43572 662 aa14.47□□□□□ -0.09
USB1-208ENST00000563207 ITGA10O75578 1167 aa14.47□□□□□ -0.09
USB1-208ENST00000563207 BCAS2O75934 225 aaPredicted RBP14.47□□□□□ -0.09
USB1-208ENST00000563207 LRATO95237 230 aa14.47□□□□□ -0.09
USB1-208ENST00000563207 IGKV3-11P04433 115 aa14.47□□□□□ -0.09
USB1-208ENST00000563207 ALDOCP09972 364 aaKnown RBP14.47□□□□□ -0.09
USB1-208ENST00000563207 FRKP42685 505 aaPredicted RBP14.47□□□□□ -0.09
USB1-208ENST00000563207 MEOX1P50221 254 aa14.47□□□□□ -0.09
USB1-208ENST00000563207 MLC1Q15049 377 aa14.47□□□□□ -0.09
USB1-208ENST00000563207 RPS6KA2Q15349 733 aa14.47□□□□□ -0.09
USB1-208ENST00000563207 PRICKLE4Q2TBC4 344 aa14.47□□□□□ -0.09
USB1-208ENST00000563207 KRTCAP3Q53RY4 240 aa14.47□□□□□ -0.09
USB1-208ENST00000563207 CPTPQ5TA50 214 aa14.47□□□□□ -0.09
USB1-208ENST00000563207 DOLPP1Q86YN1 238 aa14.47□□□□□ -0.09
USB1-208ENST00000563207 CCDC116Q8IYX3 515 aa14.47□□□□□ -0.09
USB1-208ENST00000563207 ZNF808Q8N4W9 903 aaPredicted RBP14.47□□□□□ -0.09
USB1-208ENST00000563207 GLB1L3Q8NCI6 653 aaPredicted RBP14.47□□□□□ -0.09
USB1-208ENST00000563207 ZFP28Q8NHY6 868 aa14.47□□□□□ -0.09
USB1-208ENST00000563207 DOK4Q8TEW6 326 aa14.47□□□□□ -0.09
USB1-208ENST00000563207 GFM2Q969S9 779 aaKnown RBP14.47□□□□□ -0.09
USB1-208ENST00000563207 ZBED6CLQ96FA7 236 aaPredicted RBP14.47□□□□□ -0.09
USB1-208ENST00000563207 MAGED4Q96JG8 741 aa14.47□□□□□ -0.09
USB1-208ENST00000563207 ZNF317Q96PQ6 595 aaPredicted RBP14.47□□□□□ -0.09
USB1-208ENST00000563207 OR52B2Q96RD2 323 aa14.47□□□□□ -0.09
USB1-208ENST00000563207 BHLHE41Q9C0J9 482 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms