RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 SMIM5Q71RC9 77 aa2.32□□□□□ -2.04
HDGFL3-202ENST00000562702 ANKRD23Q86SG2 305 aa2.32□□□□□ -2.04
HDGFL3-202ENST00000562702 ASPGQ86U10 573 aa2.32□□□□□ -2.04
HDGFL3-202ENST00000562702 CCDC71Q8IV32 467 aaPredicted RBP2.32□□□□□ -2.04
HDGFL3-202ENST00000562702 HSCBQ8IWL3 235 aa2.32□□□□□ -2.04
HDGFL3-202ENST00000562702 SYCP3Q8IZU3 236 aa2.32□□□□□ -2.04
HDGFL3-202ENST00000562702 OR1K1Q8NGR3 316 aa2.32□□□□□ -2.04
HDGFL3-202ENST00000562702 MRAPQ8TCY5 172 aa2.32□□□□□ -2.04
HDGFL3-202ENST00000562702 C16orf58Q96GQ5 468 aa2.32□□□□□ -2.04
HDGFL3-202ENST00000562702 CNOT6LQ96LI5 555 aaKnown RBP2.32□□□□□ -2.04
HDGFL3-202ENST00000562702 GUCD1Q96NT3 240 aa2.32□□□□□ -2.04
HDGFL3-202ENST00000562702 ELL3Q9HB65 397 aaPredicted RBP2.32□□□□□ -2.04
HDGFL3-202ENST00000562702 AMBNQ9NP70 447 aa2.32□□□□□ -2.04
HDGFL3-202ENST00000562702 ABCC13Q9NSE7 274 aa2.32□□□□□ -2.04
HDGFL3-202ENST00000562702 EIF3KQ9UBQ5 218 aaKnown RBP2.32□□□□□ -2.04
HDGFL3-202ENST00000562702 LIPT1Q9Y234 373 aa2.32□□□□□ -2.04
HDGFL3-202ENST00000562702 DHX57Q6P158 1386 aaKnown RBP2.32□□□□□ -2.04
HDGFL3-202ENST00000562702 ANKRD30BQ9BXX2 1392 aa2.32□□□□□ -2.04
HDGFL3-202ENST00000562702 ANKARQ7Z5J8 1434 aa2.32□□□□□ -2.04
HDGFL3-202ENST00000562702 DOT1LQ8TEK3 1739 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 KIAA1551Q9HCM1 1747 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 VIRMAQ69YN4 1812 aaKnown RBP2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 HCFC1P51610 2035 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 TRAV9-2A0A087WT02 112 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 A0A1W2PQ72 361 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 TMEM129A0AVI4 362 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 ZNF253O75346 499 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 NME6O75414 186 aaPredicted RBP2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 RHBDL1O75783 438 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 PIGRP01833 764 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 PRB2P02812 416 aaPredicted RBP2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 MMP10P09238 476 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 CT45A8P0DMV1 189 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 CT45A9P0DMV2 189 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 KLK2P20151 261 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 GPX3P22352 226 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 TCF7P36402 384 aaPredicted RBP2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 TNFSF10P50591 281 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 HMGCS2P54868 508 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 RFTN1Q14699 578 aaPredicted RBP2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 HEPACAMQ14CZ8 416 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 ABRAXAS2Q15018 415 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 STXBP2Q15833 593 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 SLC22A6Q4U2R8 563 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 CCDC92Q53HC0 331 aaPredicted RBP2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 CT45A2Q5DJT8 189 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 FHL5Q5TD97 284 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 CD164L2Q6UWJ8 174 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 CCBE1Q6UXH8 406 aaPredicted RBP2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 ZNF600Q6ZNG1 722 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 Q6ZRG5 221 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 GET4Q7L5D6 327 aaPredicted RBP2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 TMEM126BQ8IUX1 230 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 LAX1Q8IWV1 398 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 ARL14Q8N4G2 192 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 KLHL30-AS1Q8NEE0 82 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 GDAP1Q8TB36 358 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 ZBED6CLQ96FA7 236 aaPredicted RBP2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 SPAG8Q99932 426 aaPredicted RBP2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 AGPAT1Q99943 283 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 ACPTQ9BZG2 426 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 ZBP1Q9H171 429 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 SENP1Q9P0U3 644 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 DHRS4-AS1Q9P1J3 65 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 ARMCX1Q9P291 453 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 B4GALT7Q9UBV7 327 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 CIDEBQ9UHD4 219 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 PSORS1C1Q9UIG5 152 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 ISY1Q9ULR0 285 aaKnown RBP2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 EXOC7Q9UPT5 735 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 GPRASP1Q5JY77 1395 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 NINLQ9Y2I6 1382 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 SLIT3O75094 1523 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 MON2Q7Z3U7 1717 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 TOGARAM1Q9Y4F4 1720 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 BRCA1P38398 1863 aaKnown RBP2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 UBR3Q6ZT12 1888 aa2.31□□□□□ -2.04
HDGFL3-202ENST00000562702 A0A0U1RQK1 487 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 ZNF320A2RRD8 509 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 SRPX2O60687 465 aaPredicted RBP2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 EPOP01588 193 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 CCDC159P0C7I6 412 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 UMPSP11172 480 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 P4HA1P13674 534 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 STIP1P31948 543 aaKnown RBP2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 SERPINB6P35237 376 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 STX1BP61266 288 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 CDKL1Q00532 357 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 P2RY14Q15391 338 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 SLC15A2Q16348 729 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 C17orf58Q2M2W7 97 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 WSCD2Q2TBF2 565 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 ANKRD55Q3KP44 614 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 PRR30Q53SZ7 412 aaPredicted RBP2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 ODF2Q5BJF6 829 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 UTF1Q5T230 341 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 DCAF12Q5T6F0 453 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 KCTD11Q693B1 232 aa2.3□□□□□ -2.04
HDGFL3-202ENST00000562702 FAM43BQ6ZT52 329 aaPredicted RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms