RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 MAGED4Q96JG8 741 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 CLMPQ9H6B4 373 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 WDR55Q9H6Y2 383 aaPredicted RBP12.8□□□□□ -0.36
TPM1-230ENST00000561266 MEAF6Q9HAF1 191 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 FOLH1BQ9HBA9 442 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 AGPAT4Q9NRZ5 378 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.8□□□□□ -0.36
TPM1-230ENST00000561266 THAP1Q9NVV9 213 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 ARGLU1Q9NWB6 273 aaPredicted RBP12.8□□□□□ -0.36
TPM1-230ENST00000561266 SH3BP4Q9P0V3 963 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 CNOT11Q9UKZ1 510 aaKnown RBP12.8□□□□□ -0.36
TPM1-230ENST00000561266 HRH3Q9Y5N1 445 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 NPFFR2Q9Y5X5 522 aa12.8□□□□□ -0.36
TPM1-230ENST00000561266 DIDO1Q9BTC0 2240 aaKnown RBP12.79□□□□□ -0.36
TPM1-230ENST00000561266 NPIPA5E9PKD4 350 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 SCAMP2O15127 329 aaKnown RBP12.79□□□□□ -0.36
TPM1-230ENST00000561266 PLOD3O60568 738 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 PSMG1O95456 288 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 ALDOCP09972 364 aaKnown RBP12.79□□□□□ -0.36
TPM1-230ENST00000561266 CT45A8P0DMV1 189 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 CT45A9P0DMV2 189 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 EDN3P14138 238 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 MPIP34949 423 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 HSF1Q00613 529 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 FOXO1Q12778 655 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 HSPB3Q12988 150 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 NTRK2Q16620 822 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 CT45A2Q5DJT8 189 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 C6orf163Q5TEZ5 329 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 PRAMEF20Q5VT98 475 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 FGD2Q7Z6J4 655 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 ATCAYQ86WG3 371 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 SLC15A4Q8N697 577 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 OR2M7Q8NG81 312 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 OR4N2Q8NGD1 307 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 OR52N2Q8NGI0 321 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 DNAJB8Q8NHS0 232 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 PRR7Q8TB68 274 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 SLC22A8Q8TCC7 542 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 PAQR8Q8TEZ7 354 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 TMEM125Q96AQ2 219 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 PPCDCQ96CD2 204 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 NTNG2Q96CW9 530 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 ELP4Q96EB1 424 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 ZNF764Q96H86 408 aaPredicted RBP12.79□□□□□ -0.36
TPM1-230ENST00000561266 VSTM2LQ96N03 204 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 SLCO1B3Q9NPD5 702 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 TIMMDC1Q9NPL8 285 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 GIMAP4Q9NUV9 329 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 TUBA8Q9NY65 449 aaPredicted RBP12.79□□□□□ -0.36
TPM1-230ENST00000561266 NPIPA1Q9UND3 350 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 C19orf53Q9UNZ5 99 aaPredicted RBP12.79□□□□□ -0.36
TPM1-230ENST00000561266 GPR55Q9Y2T6 319 aaPredicted RBP12.79□□□□□ -0.36
TPM1-230ENST00000561266 KLF13Q9Y2Y9 288 aaPredicted RBP12.79□□□□□ -0.36
TPM1-230ENST00000561266 MED12Q93074 2177 aa12.79□□□□□ -0.36
TPM1-230ENST00000561266 GOLGA8QA0A0J9YX86 632 aa12.78□□□□□ -0.36
TPM1-230ENST00000561266 GOLGA8OA6NCC3 632 aa12.78□□□□□ -0.36
TPM1-230ENST00000561266 GOLGA8NF8WBI6 632 aa12.78□□□□□ -0.36
TPM1-230ENST00000561266 PLOD2O00469 737 aa12.78□□□□□ -0.36
TPM1-230ENST00000561266 ANKRD28O15084 1053 aa12.78□□□□□ -0.36
TPM1-230ENST00000561266 PDPK1O15530 556 aa12.78□□□□□ -0.36
TPM1-230ENST00000561266 ABCB1P08183 1280 aaPredicted RBP12.78□□□□□ -0.36
TPM1-230ENST00000561266 CNR1P21554 472 aa12.78□□□□□ -0.36
TPM1-230ENST00000561266 ABCD3P28288 659 aa12.78□□□□□ -0.36
TPM1-230ENST00000561266 NTSP30990 170 aa12.78□□□□□ -0.36
TPM1-230ENST00000561266 PPICP45877 212 aa12.78□□□□□ -0.36
TPM1-230ENST00000561266 ASMTP46597 345 aa12.78□□□□□ -0.36
TPM1-230ENST00000561266 PHC1P78364 1004 aa12.78□□□□□ -0.36
TPM1-230ENST00000561266 ALDH6A1Q02252 535 aaKnown RBP12.78□□□□□ -0.36
TPM1-230ENST00000561266 SLC9B1Q4ZJI4 515 aa12.78□□□□□ -0.36
TPM1-230ENST00000561266 HLA-DQA1Q5Y7H0 255 aa12.78□□□□□ -0.36
TPM1-230ENST00000561266 SAMD14Q8IZD0 417 aaPredicted RBP12.78□□□□□ -0.36
TPM1-230ENST00000561266 OR2L13Q8N349 312 aa12.78□□□□□ -0.36
TPM1-230ENST00000561266 ZFP62Q8NB50 900 aaPredicted RBP12.78□□□□□ -0.36
TPM1-230ENST00000561266 GOLM1Q8NBJ4 401 aa12.78□□□□□ -0.36
TPM1-230ENST00000561266 FAM13CQ8NE31 585 aa12.78□□□□□ -0.36
TPM1-230ENST00000561266 C17orf47Q8NEP4 570 aa12.78□□□□□ -0.36
TPM1-230ENST00000561266 HGDQ93099 445 aa12.78□□□□□ -0.36
TPM1-230ENST00000561266 LCORQ96JN0 433 aaPredicted RBP12.78□□□□□ -0.36
TPM1-230ENST00000561266 TEX37Q96LM6 180 aa12.78□□□□□ -0.36
TPM1-230ENST00000561266 NODALQ96S42 347 aa12.78□□□□□ -0.36
TPM1-230ENST00000561266 SIRT3Q9NTG7 399 aaPredicted RBP12.78□□□□□ -0.36
TPM1-230ENST00000561266 ASIC5Q9NY37 505 aa12.78□□□□□ -0.36
TPM1-230ENST00000561266 PCNX1Q96RV3 2341 aa12.77□□□□□ -0.36
TPM1-230ENST00000561266 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.77□□□□□ -0.37
TPM1-230ENST00000561266 A0A087WV62 115 aa12.77□□□□□ -0.37
TPM1-230ENST00000561266 FAM166BA8MTA8 275 aa12.77□□□□□ -0.37
TPM1-230ENST00000561266 HMGB1P1B2RPK0 211 aaPredicted RBP12.77□□□□□ -0.37
TPM1-230ENST00000561266 KLF11O14901 512 aa12.77□□□□□ -0.37
TPM1-230ENST00000561266 HS6ST1O60243 411 aa12.77□□□□□ -0.37
TPM1-230ENST00000561266 GLSO94925 669 aaPredicted RBP12.77□□□□□ -0.37
TPM1-230ENST00000561266 UNC5CO95185 931 aa12.77□□□□□ -0.37
TPM1-230ENST00000561266 CRYABP02511 175 aaKnown RBP12.77□□□□□ -0.37
TPM1-230ENST00000561266 CELA3AP09093 270 aa12.77□□□□□ -0.37
TPM1-230ENST00000561266 RFPL3SP0C7P2 107 aa12.77□□□□□ -0.37
TPM1-230ENST00000561266 PRPS2P11908 318 aa12.77□□□□□ -0.37
TPM1-230ENST00000561266 DRD5P21918 477 aa12.77□□□□□ -0.37
TPM1-230ENST00000561266 EPHA3P29320 983 aa12.77□□□□□ -0.37
TPM1-230ENST00000561266 PTGDSP41222 190 aa12.77□□□□□ -0.37
TPM1-230ENST00000561266 WNT3P56703 355 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms