RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 SSR4P51571 173 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 NR0B1P51843 470 aaKnown RBP10.55□□□□□ -0.72
SNX1-204ENST00000559061 DGKQP52824 942 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 MLLT10P55197 1068 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 HBA1P69905 142 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 GAB1Q13480 694 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 TLR1Q15399 786 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 PDCD4Q53EL6 469 aaKnown RBP10.55□□□□□ -0.72
SNX1-204ENST00000559061 CPTPQ5TA50 214 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 FUNDC1Q8IVP5 155 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 PRR22Q8IZ63 422 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 SAMD14Q8IZD0 417 aaPredicted RBP10.55□□□□□ -0.72
SNX1-204ENST00000559061 CLEC4FQ8N1N0 589 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 TEX19Q8NA77 164 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 C17orf47Q8NEP4 570 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 OR4N2Q8NGD1 307 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 OR8J2Q8NGG1 315 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 ERP27Q96DN0 273 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 FAM120BQ96EK7 910 aaKnown RBP10.55□□□□□ -0.72
SNX1-204ENST00000559061 UTP23Q9BRU9 249 aaKnown RBP10.55□□□□□ -0.72
SNX1-204ENST00000559061 DUSP26Q9BV47 211 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 BHLHE41Q9C0J9 482 aaPredicted RBP10.55□□□□□ -0.72
SNX1-204ENST00000559061 SERHL2Q9H4I8 314 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 NPHS2Q9NP85 383 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 TCF7L2Q9NQB0 619 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 SLC6A13Q9NSD5 602 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 GIMAP4Q9NUV9 329 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 LRFN1Q9P244 771 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 BCAP29Q9UHQ4 241 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 TEKT2Q9UIF3 430 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 ANAPC2Q9UJX6 822 aa10.55□□□□□ -0.72
SNX1-204ENST00000559061 G3BP2Q9UN86 482 aaKnown RBP10.55□□□□□ -0.72
SNX1-204ENST00000559061 GPR55Q9Y2T6 319 aaPredicted RBP10.55□□□□□ -0.72
SNX1-204ENST00000559061 C2orf92A0A1B0GVN3 265 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 DYTNA2CJ06 578 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 B4DXG7 233 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 TO15178 435 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 NME2P1O60361 137 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 SLC25A12O75746 678 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 CCL3P10147 92 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 ACP2P11117 423 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 HOXB9P17482 250 aaPredicted RBP10.54□□□□□ -0.72
SNX1-204ENST00000559061 NME2P22392 152 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 CDKN2CP42773 168 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 FAM174BQ3ZCQ3 159 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 HSP90B2PQ58FF3 399 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 ZNF766Q5HY98 468 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 RNFT1Q5M7Z0 435 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 ZNF324BQ6AW86 544 aaPredicted RBP10.54□□□□□ -0.72
SNX1-204ENST00000559061 NXNQ6DKJ4 435 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 PAOXQ6QHF9 649 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 IL20RBQ6UXL0 311 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 SLC29A4Q7RTT9 530 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 R3HCC1LQ7Z5L2 792 aaKnown RBP10.54□□□□□ -0.72
SNX1-204ENST00000559061 ANKRD46Q86W74 232 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 ARFGAP2Q8N6H7 521 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 OR10G3Q8NGC4 313 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 OR5L2Q8NGL0 311 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 CEP70Q8NHQ1 597 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 TM9SF4Q92544 642 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 HGDQ93099 445 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 TP53INP1Q96A56 240 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 SNRNP40Q96DI7 357 aaKnown RBP10.54□□□□□ -0.72
SNX1-204ENST00000559061 SPACA9Q96E40 222 aaPredicted RBP10.54□□□□□ -0.72
SNX1-204ENST00000559061 ZBED6CLQ96FA7 236 aaPredicted RBP10.54□□□□□ -0.72
SNX1-204ENST00000559061 LMF2Q9BU23 707 aaKnown RBP10.54□□□□□ -0.72
SNX1-204ENST00000559061 CCDC28BQ9BUN5 200 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 DPY30Q9C005 99 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 SERHLQ9NQF3 203 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 GPATCH2Q9NW75 528 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 DCTN4Q9UJW0 460 aa10.54□□□□□ -0.72
SNX1-204ENST00000559061 CNOT11Q9UKZ1 510 aaKnown RBP10.54□□□□□ -0.72
SNX1-204ENST00000559061 COPG1Q9Y678 874 aaKnown RBP10.54□□□□□ -0.72
SNX1-204ENST00000559061 CHCHD2Q9Y6H1 151 aaPredicted RBP10.54□□□□□ -0.72
SNX1-204ENST00000559061 TRAV17A0A0B4J275 112 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 A0A1W2PRB8 838 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 FRG2CA6NGY1 282 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 RNASET2O00584 256 aaKnown RBP10.53□□□□□ -0.72
SNX1-204ENST00000559061 FCHO1O14526 889 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 UBDO15205 165 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 DYRK3O43781 588 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 SLITRK5O94991 958 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 IGKV1D-16P01601 117 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 SP1P08047 785 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 IDO1P14902 403 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 DRD5P21918 477 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 MST1P26927 711 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 ABCD3P28288 659 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 PTPN6P29350 595 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 PTGDSP41222 190 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 PPICP45877 212 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 CYB561P49447 251 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 MANFP55145 182 aaKnown RBP10.53□□□□□ -0.72
SNX1-204ENST00000559061 FBXW4P57775 412 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 OC90Q02509 493 aaPredicted RBP10.53□□□□□ -0.72
SNX1-204ENST00000559061 TLE1Q04724 770 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 SF3A3Q12874 501 aaKnown RBP eCLIP10.53□□□□□ -0.72
SNX1-204ENST00000559061 INPP5JQ15735 1006 aaPredicted RBP10.53□□□□□ -0.72
SNX1-204ENST00000559061 NTRK2Q16620 822 aa10.53□□□□□ -0.72
SNX1-204ENST00000559061 PGS1Q32NB8 556 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms