RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 CISD2Q8N5K1 135 aaKnown RBP13.25□□□□□ -0.29
USP3-205ENST00000557884 HORMAD2Q8N7B1 307 aa13.25□□□□□ -0.29
USP3-205ENST00000557884 ERP27Q96DN0 273 aa13.25□□□□□ -0.29
USP3-205ENST00000557884 C5orf34Q96MH7 638 aa13.25□□□□□ -0.29
USP3-205ENST00000557884 NXF5Q9H1B4 397 aaKnown RBP13.25□□□□□ -0.29
USP3-205ENST00000557884 FOLH1BQ9HBA9 442 aa13.25□□□□□ -0.29
USP3-205ENST00000557884 EQTNQ9NQ60 294 aa13.25□□□□□ -0.29
USP3-205ENST00000557884 FGFR1OP2Q9NVK5 253 aa13.25□□□□□ -0.29
USP3-205ENST00000557884 C19orf53Q9UNZ5 99 aaPredicted RBP13.25□□□□□ -0.29
USP3-205ENST00000557884 MAPRE3Q9UPY8 281 aa13.25□□□□□ -0.29
USP3-205ENST00000557884 SNX8Q9Y5X2 465 aa13.25□□□□□ -0.29
USP3-205ENST00000557884 A0A0G2JND7 137 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 COQ9O75208 318 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 BCAS2O75934 225 aaPredicted RBP13.24□□□□□ -0.29
USP3-205ENST00000557884 SLITRK5O94991 958 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 IDO1P14902 403 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 KIR3DL1P43629 444 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 DGKQP52824 942 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 PRKAG1P54619 331 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 WNT3P56703 355 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 CORO7P57737 925 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 PMP22Q01453 160 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 SRSF11Q05519 484 aaKnown RBP13.24□□□□□ -0.29
USP3-205ENST00000557884 MAPKAPK3Q16644 382 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 FAM174BQ3ZCQ3 159 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 PDCD4Q53EL6 469 aaKnown RBP13.24□□□□□ -0.29
USP3-205ENST00000557884 OPN5Q6U736 354 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 LYPD8Q6UX82 237 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 MDGA2Q7Z553 956 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 CAMKMTQ7Z624 323 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 ANKRD46Q86W74 232 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 CLECL1Q8IZS7 167 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 OR2L13Q8N349 312 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 OR5M3Q8NGP4 307 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 OR5P2Q8WZ92 322 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 TMEM125Q96AQ2 219 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 VSTM2LQ96N03 204 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 ZBTB18Q99592 522 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 CCDC28BQ9BUN5 200 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 TRIM4Q9C037 500 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 CLMPQ9H6B4 373 aa13.24□□□□□ -0.29
USP3-205ENST00000557884 TRIM45Q9H8W5 580 aaPredicted RBP13.24□□□□□ -0.29
USP3-205ENST00000557884 SIRT3Q9NTG7 399 aaPredicted RBP13.24□□□□□ -0.29
USP3-205ENST00000557884 G3V3Y1 287 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 ERN1O75460 977 aaKnown RBP13.23□□□□□ -0.29
USP3-205ENST00000557884 SP1P08047 785 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 FBXO45P0C2W1 286 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 S100A3P33764 101 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 SOAT1P35610 550 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 GYS2P54840 703 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 NRG3P56975 720 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 PHC1P78364 1004 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 GSTA3Q16772 222 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 SPDYE7PQ495Y7 208 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 SLC25A25Q6KCM7 469 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 PAOXQ6QHF9 649 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 NPSR1Q6W5P4 371 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 GALNTL5Q7Z4T8 443 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 GPALPP1Q8IXQ4 340 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 FAM13CQ8NE31 585 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 NUP43Q8NFH3 380 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 OR8J2Q8NGG1 315 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 OR9I1Q8NGQ6 314 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 FBXO30Q8TB52 745 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 CPT1CQ8TCG5 803 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 TP53INP1Q96A56 240 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 TESCQ96BS2 214 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 SPACA9Q96E40 222 aaPredicted RBP13.23□□□□□ -0.29
USP3-205ENST00000557884 FAM120BQ96EK7 910 aaKnown RBP13.23□□□□□ -0.29
USP3-205ENST00000557884 SCMH1Q96GD3 660 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 LCORQ96JN0 433 aaPredicted RBP13.23□□□□□ -0.29
USP3-205ENST00000557884 CCDC134Q9H6E4 229 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 CXorf36Q9H7Y0 433 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 TIMMDC1Q9NPL8 285 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 TAS2R9Q9NYW1 312 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 NTNG1Q9Y2I2 539 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 CNTRLQ7Z7A1 2325 aa13.23□□□□□ -0.29
USP3-205ENST00000557884 COL6A6A6NMZ7 2263 aa13.22□□□□□ -0.29
USP3-205ENST00000557884 FRG2CA6NGY1 282 aa13.22□□□□□ -0.29
USP3-205ENST00000557884 CDK2AP1O14519 115 aa13.22□□□□□ -0.29
USP3-205ENST00000557884 EMC8O43402 210 aa13.22□□□□□ -0.29
USP3-205ENST00000557884 SLC22A3O75751 556 aa13.22□□□□□ -0.29
USP3-205ENST00000557884 PSMG1O95456 288 aa13.22□□□□□ -0.29
USP3-205ENST00000557884 CPSF4O95639 269 aaKnown RBP13.22□□□□□ -0.29
USP3-205ENST00000557884 CT45A8P0DMV1 189 aa13.22□□□□□ -0.29
USP3-205ENST00000557884 CT45A9P0DMV2 189 aa13.22□□□□□ -0.29
USP3-205ENST00000557884 TROVE2P10155 538 aaKnown RBP eCLIP13.22□□□□□ -0.29
USP3-205ENST00000557884 ABCD3P28288 659 aa13.22□□□□□ -0.29
USP3-205ENST00000557884 PPICP45877 212 aa13.22□□□□□ -0.29
USP3-205ENST00000557884 FBXW4P57775 412 aa13.22□□□□□ -0.29
USP3-205ENST00000557884 GPR85P60893 370 aa13.22□□□□□ -0.29
USP3-205ENST00000557884 STX1BP61266 288 aa13.22□□□□□ -0.29
USP3-205ENST00000557884 DCAF7P61962 342 aa13.22□□□□□ -0.29
USP3-205ENST00000557884 HBA1P69905 142 aa13.22□□□□□ -0.29
USP3-205ENST00000557884 TLE1Q04724 770 aa13.22□□□□□ -0.29
USP3-205ENST00000557884 PLCXD2Q0VAA5 305 aa13.22□□□□□ -0.29
USP3-205ENST00000557884 MLC1Q15049 377 aa13.22□□□□□ -0.29
USP3-205ENST00000557884 INPP5JQ15735 1006 aaPredicted RBP13.22□□□□□ -0.29
USP3-205ENST00000557884 ZNF791Q3KP31 576 aaPredicted RBP13.22□□□□□ -0.29
USP3-205ENST00000557884 CT45A2Q5DJT8 189 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms