RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 PRKACGP22612 351 aa12.9□□□□□ -0.34
EFCAB11-212ENST00000556639 CHRNEQ04844 493 aa12.9□□□□□ -0.34
EFCAB11-212ENST00000556639 FOXD4Q12950 439 aaPredicted RBP12.9□□□□□ -0.34
EFCAB11-212ENST00000556639 MINDY4Q4G0A6 757 aa12.9□□□□□ -0.34
EFCAB11-212ENST00000556639 GPAT3Q53EU6 434 aa12.9□□□□□ -0.34
EFCAB11-212ENST00000556639 OTUD3Q5T2D3 398 aaPredicted RBP12.9□□□□□ -0.34
EFCAB11-212ENST00000556639 CCNJQ5T5M9 372 aa12.9□□□□□ -0.34
EFCAB11-212ENST00000556639 ARHGAP40Q5TG30 622 aa12.9□□□□□ -0.34
EFCAB11-212ENST00000556639 LGI4Q8N135 537 aa12.9□□□□□ -0.34
EFCAB11-212ENST00000556639 OR52R1Q8NGF1 315 aa12.9□□□□□ -0.34
EFCAB11-212ENST00000556639 ADAMTS15Q8TE58 950 aa12.9□□□□□ -0.34
EFCAB11-212ENST00000556639 PIK3R3Q92569 461 aa12.9□□□□□ -0.34
EFCAB11-212ENST00000556639 RIT1Q92963 219 aa12.9□□□□□ -0.34
EFCAB11-212ENST00000556639 PMEPA1Q969W9 287 aa12.9□□□□□ -0.34
EFCAB11-212ENST00000556639 RBM18Q96H35 190 aaKnown RBP12.9□□□□□ -0.34
EFCAB11-212ENST00000556639 MESP1Q9BRJ9 268 aa12.9□□□□□ -0.34
EFCAB11-212ENST00000556639 FANCEQ9HB96 536 aa12.9□□□□□ -0.34
EFCAB11-212ENST00000556639 FBXO34Q9NWN3 711 aa12.9□□□□□ -0.34
EFCAB11-212ENST00000556639 PTGFRNQ9P2B2 879 aa12.9□□□□□ -0.34
EFCAB11-212ENST00000556639 DNAJB9Q9UBS3 223 aa12.9□□□□□ -0.34
EFCAB11-212ENST00000556639 CTSFQ9UBX1 484 aa12.9□□□□□ -0.34
EFCAB11-212ENST00000556639 MRPS33Q9Y291 106 aaKnown RBP12.9□□□□□ -0.34
EFCAB11-212ENST00000556639 A0A1B0GX78 115 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 J3KTA2 159 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 DLGAP1O14490 977 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 EI24O14681 340 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 PLOD3O60568 738 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 FABP3P05413 133 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 ZNF883P0CG24 379 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 CCL4P13236 92 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 CD247P20963 164 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 ATP6V1C1P21283 382 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 FBLP22087 321 aaKnown RBP12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 IGLV3-21P80748 117 aaPredicted RBP12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 ACY1Q03154 408 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 PUM1Q14671 1186 aaKnown RBP eCLIP12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 C6orf52Q5T4I8 152 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 LAIR1Q6GTX8 287 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 PPP4R4Q6NUP7 873 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 NIPAL1Q6NVV3 410 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 COX15Q7KZN9 410 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 ST13P4Q8IZP2 240 aaPredicted RBP12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 ZNF675Q8TD23 568 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 BDH2Q9BUT1 245 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 VCX3BQ9H321 246 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 AKIRIN1Q9H9L7 192 aaPredicted RBP12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 DTX4Q9Y2E6 619 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 TNFRSF10AO00220 468 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 GNGT2O14610 69 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 SCRG1O75711 98 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 IFNA16P05015 189 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 PGDP52209 483 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 DSG2Q14126 1118 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 ZNF267Q14586 743 aaPredicted RBP12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 MLIPQ5VWP3 458 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 CDC73Q6P1J9 531 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 PATL1Q86TB9 770 aaKnown RBP12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 RBM45Q8IUH3 476 aaKnown RBP12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 GALNT12Q8IXK2 581 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 VWA5B2Q8N398 1253 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 ZNF321PQ8N8H1 164 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 OR4D11Q8NGI4 311 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 MVB12AQ96EY5 273 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 SLC7A5P2Q9GIP4 190 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 SLC38A1Q9H2H9 487 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 RARRES3Q9UL19 164 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 PCDHGB5Q9Y5G0 923 aa12.89□□□□□ -0.35
EFCAB11-212ENST00000556639 A0A087WV62 115 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 EFCAB7A8K855 629 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 A8MVJ9 347 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 EPPINO95925 133 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 ZNF806P0C7X5 589 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 ACP1P24666 158 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 RNF144AP50876 292 aaPredicted RBP12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 ARSFP54793 590 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 HSD17B7P56937 341 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 ZFP36L1Q07352 338 aaKnown RBP12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 MAP4K2Q12851 820 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 GK3PQ14409 553 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 LCN10Q6JVE6 187 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 LACC1Q8IV20 430 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 MAGEE2Q8TD90 523 aaPredicted RBP12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 DGAT2Q96PD7 388 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 CNPPD1Q9BV87 410 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 AMBRA1Q9C0C7 1298 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 YY1AP1Q9H869 796 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 SMURF2Q9HAU4 748 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 NDUFAF4Q9P032 175 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 ZNF639Q9UID6 485 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 MKLN1Q9UL63 735 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 ERVK-19Q9WJR5 959 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 EP300Q09472 2414 aaPredicted RBP12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 GXYLT2A0PJZ3 443 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 PRR33A8MZF0 331 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 FLRT2O43155 660 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 FESP07332 822 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 ACADSP16219 412 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 STT3AP46977 705 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 TCF15Q12870 199 aa12.88□□□□□ -0.35
EFCAB11-212ENST00000556639 IFI44LQ53G44 452 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms