RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 CLECL1Q8IZS7 167 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 EID3Q8N140 333 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 SLC22A18ASQ8N1D0 253 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 PACRGLQ8N7B6 248 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 FAM47BQ8NA70 645 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 GOT1L1Q8NHS2 421 aaPredicted RBP6.43□□□□□ -1.38
SLIRP-204ENST00000555890 DNASE2BQ8WZ79 361 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 OR5P2Q8WZ92 322 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 TM4SF18Q96CE8 201 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 CENPNQ96H22 339 aaPredicted RBP6.43□□□□□ -1.38
SLIRP-204ENST00000555890 ZNF764Q96H86 408 aaPredicted RBP6.43□□□□□ -1.38
SLIRP-204ENST00000555890 RNF145Q96MT1 663 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 ZNF570Q96NI8 536 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 KCNC2Q96PR1 638 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 NR1H4Q96RI1 486 aaPredicted RBP6.43□□□□□ -1.38
SLIRP-204ENST00000555890 SEPHS2Q99611 448 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 NRTNQ99748 197 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 C9orf16Q9BUW7 83 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 ROGDIQ9GZN7 287 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 SEMA6AQ9H2E6 1030 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 SEMA6CQ9H3T2 930 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 IKZF5Q9H5V7 419 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 MAGIXQ9H6Y5 334 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 RPF2Q9H7B2 306 aaKnown RBP6.43□□□□□ -1.38
SLIRP-204ENST00000555890 DDX31Q9H8H2 851 aaKnown RBP6.43□□□□□ -1.38
SLIRP-204ENST00000555890 TPT1P8Q9HAU6 139 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 BATF3Q9NR55 127 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 AGPAT4Q9NRZ5 378 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 SLC6A13Q9NSD5 602 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 OLAHQ9NV23 265 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 SPHK1Q9NYA1 384 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 TAS2R9Q9NYW1 312 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 CPNE7Q9UBL6 633 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 RPS6KA6Q9UK32 745 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 RAB26Q9ULW5 256 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 USP22Q9UPT9 525 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 SAMD4AQ9UPU9 718 aaKnown RBP6.43□□□□□ -1.38
SLIRP-204ENST00000555890 EXO1Q9UQ84 846 aaKnown RBP6.43□□□□□ -1.38
SLIRP-204ENST00000555890 PCDHGB2Q9Y5G2 931 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 CUBNO60494 3623 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 KMT2CQ8NEZ4 4911 aaKnown RBP6.42□□□□□ -1.38
SLIRP-204ENST00000555890 IGKV1-8A0A0C4DH67 115 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 RNF103-CHMP3A0A140T963 221 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 GSAPA4D1B5 854 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 URADA6NGE7 173 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 RTCAO00442 366 aaKnown RBP6.42□□□□□ -1.38
SLIRP-204ENST00000555890 TXNDC9O14530 226 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 HAT1O14929 419 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 YY2O15391 372 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 ERI3O43414 337 aaKnown RBP6.42□□□□□ -1.38
SLIRP-204ENST00000555890 TNFSF14O43557 240 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 TPST1O60507 370 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 KLHL18O94889 574 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 C6orf47O95873 294 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 TBX6O95947 436 aaPredicted RBP6.42□□□□□ -1.38
SLIRP-204ENST00000555890 FAM58BPP0C7Q3 252 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 SLC35G6P0C7Q6 338 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 UGT2B7P16662 529 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 ZNF10P21506 573 aaPredicted RBP6.42□□□□□ -1.38
SLIRP-204ENST00000555890 UQCRC2P22695 453 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 PEBP1P30086 187 aaKnown RBP6.42□□□□□ -1.38
SLIRP-204ENST00000555890 CHI3L1P36222 383 aaPredicted RBP6.42□□□□□ -1.38
SLIRP-204ENST00000555890 BCL6P41182 706 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 ALDH9A1P49189 494 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 SEPHS1P49903 392 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 PLA2G16P53816 162 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 AQP4P55087 323 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 UBE2IP63279 158 aaKnown RBP6.42□□□□□ -1.38
SLIRP-204ENST00000555890 MRPS35P82673 323 aaKnown RBP6.42□□□□□ -1.38
SLIRP-204ENST00000555890 RELAQ04206 551 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 FOLH1Q04609 750 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 LTBQ06643 244 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 VEZF1Q14119 521 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 GPR18Q14330 331 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 SLC9A5Q14940 896 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 ELOCQ15369 112 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 ATP6AP1Q15904 470 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 SLC5A12Q1EHB4 618 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 HLA-BQ31612 363 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 ADPRMQ3LIE5 342 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 ZNF542PQ5EBM4 170 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 TMTC4Q5T4D3 741 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 INTS11Q5TA45 600 aaKnown RBP6.42□□□□□ -1.38
SLIRP-204ENST00000555890 KLHL35Q6PF15 583 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 ANGPTL8Q6UXH0 198 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 ZBTB49Q6ZSB9 765 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 ASPGQ86U10 573 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 OOSP2Q86WS3 158 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 GKN2Q86XP6 184 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 SLC30A8Q8IWU4 369 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 SDR16C5Q8N3Y7 309 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 ZCCHC7Q8N3Z6 543 aaKnown RBP6.42□□□□□ -1.38
SLIRP-204ENST00000555890 GALNT4Q8N4A0 578 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 ZNF655Q8N720 491 aaPredicted RBP6.42□□□□□ -1.38
SLIRP-204ENST00000555890 CAMKVQ8NCB2 501 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 CLRN3Q8NCR9 226 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 FAM46DQ8NEK8 389 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 C1orf162Q8NEQ5 155 aaPredicted RBP6.42□□□□□ -1.38
SLIRP-204ENST00000555890 OR2L5Q8NG80 312 aa6.42□□□□□ -1.38
SLIRP-204ENST00000555890 OR10G6Q8NH81 332 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms