RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 CCDC71LQ8N9Z2 235 aa1.49□□□□□ -2.17
SRP54-207ENST00000555535 FNDC8Q8TC99 324 aa1.49□□□□□ -2.17
SRP54-207ENST00000555535 SLC35E1Q96K37 410 aa1.49□□□□□ -2.17
SRP54-207ENST00000555535 TSSK1BQ9BXA7 367 aa1.49□□□□□ -2.17
SRP54-207ENST00000555535 OR10A4Q9H209 315 aa1.49□□□□□ -2.17
SRP54-207ENST00000555535 NRN1Q9NPD7 142 aa1.49□□□□□ -2.17
SRP54-207ENST00000555535 FBN3Q75N90 2809 aa1.49□□□□□ -2.17
SRP54-207ENST00000555535 SLIT3O75094 1523 aa1.49□□□□□ -2.17
SRP54-207ENST00000555535 KIF7Q2M1P5 1343 aa1.48□□□□□ -2.17
SRP54-207ENST00000555535 USP27XA6NNY8 438 aa1.48□□□□□ -2.17
SRP54-207ENST00000555535 SIX3O95343 332 aaPredicted RBP1.48□□□□□ -2.17
SRP54-207ENST00000555535 TIMP1P01033 207 aa1.48□□□□□ -2.17
SRP54-207ENST00000555535 MBL2P11226 248 aaPredicted RBP1.48□□□□□ -2.17
SRP54-207ENST00000555535 MAGEB1P43366 347 aa1.48□□□□□ -2.17
SRP54-207ENST00000555535 POU3F4P49335 361 aa1.48□□□□□ -2.17
SRP54-207ENST00000555535 EGFEM1PQ0D2K5 195 aa1.48□□□□□ -2.17
SRP54-207ENST00000555535 HSPA14Q0VDF9 509 aa1.48□□□□□ -2.17
SRP54-207ENST00000555535 PTGES3Q15185 160 aaKnown RBP1.48□□□□□ -2.17
SRP54-207ENST00000555535 ACKR1Q16570 336 aa1.48□□□□□ -2.17
SRP54-207ENST00000555535 TWISTNBQ3B726 338 aaPredicted RBP1.48□□□□□ -2.17
SRP54-207ENST00000555535 TCHHL1Q5QJ38 904 aaPredicted RBP1.48□□□□□ -2.17
SRP54-207ENST00000555535 TRAT1Q6PIZ9 186 aa1.48□□□□□ -2.17
SRP54-207ENST00000555535 LRP11Q86VZ4 500 aa1.48□□□□□ -2.17
SRP54-207ENST00000555535 LINC00518Q8N0U6 118 aa1.48□□□□□ -2.17
SRP54-207ENST00000555535 ZBTB44Q8NCP5 570 aa1.48□□□□□ -2.17
SRP54-207ENST00000555535 OR4L1Q8NH43 312 aa1.48□□□□□ -2.17
SRP54-207ENST00000555535 COG3Q96JB2 828 aa1.48□□□□□ -2.17
SRP54-207ENST00000555535 IL4I1Q96RQ9 567 aa1.48□□□□□ -2.17
SRP54-207ENST00000555535 MAF1Q9H063 256 aa1.48□□□□□ -2.17
SRP54-207ENST00000555535 VCXQ9H320 206 aa1.48□□□□□ -2.17
SRP54-207ENST00000555535 NXF3Q9H4D5 531 aaKnown RBP1.48□□□□□ -2.17
SRP54-207ENST00000555535 GLIPR2Q9H4G4 154 aa1.48□□□□□ -2.17
SRP54-207ENST00000555535 ZDHHC6Q9H6R6 413 aa1.48□□□□□ -2.17
SRP54-207ENST00000555535 DCTPP1Q9H773 170 aa1.48□□□□□ -2.17
SRP54-207ENST00000555535 TUBGCP4Q9UGJ1 667 aa1.48□□□□□ -2.17
SRP54-207ENST00000555535 ERVK-19Q9WJR5 959 aa1.48□□□□□ -2.17
SRP54-207ENST00000555535 TRBV6-6A0A0A6YYG2 114 aa1.47□□□□□ -2.17
SRP54-207ENST00000555535 CYB561D2O14569 222 aa1.47□□□□□ -2.17
SRP54-207ENST00000555535 PDE5AO76074 875 aa1.47□□□□□ -2.17
SRP54-207ENST00000555535 TXNDC12O95881 172 aa1.47□□□□□ -2.17
SRP54-207ENST00000555535 B4GALT1P15291 398 aa1.47□□□□□ -2.17
SRP54-207ENST00000555535 SLC34A1Q06495 639 aa1.47□□□□□ -2.17
SRP54-207ENST00000555535 BCL2L1Q07817 233 aa1.47□□□□□ -2.17
SRP54-207ENST00000555535 ARHGAP1Q07960 439 aa1.47□□□□□ -2.17
SRP54-207ENST00000555535 MOBPQ13875 183 aa1.47□□□□□ -2.17
SRP54-207ENST00000555535 GIT2Q14161 759 aa1.47□□□□□ -2.17
SRP54-207ENST00000555535 UFSP1Q6NVU6 142 aa1.47□□□□□ -2.17
SRP54-207ENST00000555535 PIWIL3Q7Z3Z3 882 aaKnown RBP1.47□□□□□ -2.17
SRP54-207ENST00000555535 ASPGQ86U10 573 aa1.47□□□□□ -2.17
SRP54-207ENST00000555535 GGHQ92820 318 aa1.47□□□□□ -2.17
SRP54-207ENST00000555535 ULK4Q96C45 1275 aa1.47□□□□□ -2.17
SRP54-207ENST00000555535 SPAG8Q99932 426 aaPredicted RBP1.47□□□□□ -2.17
SRP54-207ENST00000555535 TM2D1Q9BX74 207 aa1.47□□□□□ -2.17
SRP54-207ENST00000555535 SRD5A3Q9H8P0 318 aa1.47□□□□□ -2.17
SRP54-207ENST00000555535 CACNG2Q9Y698 323 aa1.47□□□□□ -2.17
SRP54-207ENST00000555535 IGKV1D-17A0A075B6S4 117 aa1.46□□□□□ -2.18
SRP54-207ENST00000555535 DLGAP1O14490 977 aa1.46□□□□□ -2.18
SRP54-207ENST00000555535 TRAF3IP2O43734 574 aaPredicted RBP1.46□□□□□ -2.18
SRP54-207ENST00000555535 SLU7O95391 586 aaKnown RBP1.46□□□□□ -2.18
SRP54-207ENST00000555535 PGK1P00558 417 aa1.46□□□□□ -2.18
SRP54-207ENST00000555535 NUDT17P0C025 328 aa1.46□□□□□ -2.18
SRP54-207ENST00000555535 TPBGLP0DKB5 382 aa1.46□□□□□ -2.18
SRP54-207ENST00000555535 CT45A8P0DMV1 189 aa1.46□□□□□ -2.18
SRP54-207ENST00000555535 CT45A9P0DMV2 189 aa1.46□□□□□ -2.18
SRP54-207ENST00000555535 GABRR1P24046 479 aa1.46□□□□□ -2.18
SRP54-207ENST00000555535 TNFSF10P50591 281 aa1.46□□□□□ -2.18
SRP54-207ENST00000555535 RPS4XP62701 263 aaKnown RBP1.46□□□□□ -2.18
SRP54-207ENST00000555535 PAX5Q02548 391 aa1.46□□□□□ -2.18
SRP54-207ENST00000555535 KLF5Q13887 457 aaPredicted RBP1.46□□□□□ -2.18
SRP54-207ENST00000555535 LY6EQ16553 131 aa1.46□□□□□ -2.18
SRP54-207ENST00000555535 HAGHQ16775 308 aa1.46□□□□□ -2.18
SRP54-207ENST00000555535 CT45A2Q5DJT8 189 aa1.46□□□□□ -2.18
SRP54-207ENST00000555535 ZFP2Q6ZN57 461 aa1.46□□□□□ -2.18
SRP54-207ENST00000555535 HSD17B13Q7Z5P4 300 aaPredicted RBP1.46□□□□□ -2.18
SRP54-207ENST00000555535 ERICH1Q86X53 443 aa1.46□□□□□ -2.18
SRP54-207ENST00000555535 THEM5Q8N1Q8 247 aa1.46□□□□□ -2.18
SRP54-207ENST00000555535 UBLCP1Q8WVY7 318 aaPredicted RBP1.46□□□□□ -2.18
SRP54-207ENST00000555535 CXorf58Q96LI9 332 aa1.46□□□□□ -2.18
SRP54-207ENST00000555535 NRTNQ99748 197 aa1.46□□□□□ -2.18
SRP54-207ENST00000555535 NICN1Q9BSH3 213 aa1.46□□□□□ -2.18
SRP54-207ENST00000555535 SLC26A1Q9H2B4 701 aa1.46□□□□□ -2.18
SRP54-207ENST00000555535 TSPY26PQ9H489 355 aa1.46□□□□□ -2.18
SRP54-207ENST00000555535 ALG9Q9H6U8 611 aa1.46□□□□□ -2.18
SRP54-207ENST00000555535 DCLRE1BQ9H816 532 aa1.46□□□□□ -2.18
SRP54-207ENST00000555535 PFDN4Q9NQP4 134 aa1.46□□□□□ -2.18
SRP54-207ENST00000555535 ARHGEF37A1IGU5 675 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 YJEFN3A6XGL0 299 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.45□□□□□ -2.18
SRP54-207ENST00000555535 ABCD4O14678 606 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 SLC30A4O14863 429 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 HTATSF1O43719 755 aaKnown RBP1.45□□□□□ -2.18
SRP54-207ENST00000555535 RANBP6O60518 1105 aaKnown RBP1.45□□□□□ -2.18
SRP54-207ENST00000555535 ATP9AO75110 1047 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 ZNF254O75437 659 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 IGKV1-17P01599 117 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 HOXB7P09629 217 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 TSPY3P0CV98 308 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 TSPY8P0CW00 308 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 SOAT1P35610 550 aa1.45□□□□□ -2.18
SRP54-207ENST00000555535 ELAVL3Q14576 367 aaKnown RBP1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms