RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 GTF3C1Q12789 2109 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 C6orf163Q5TEZ5 329 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 HLA-DQA1Q5Y7H0 255 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 SLC22A10Q63ZE4 541 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 NPSR1Q6W5P4 371 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 C3P1Q6ZMU1 363 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 Q6ZPB1 254 aaPredicted RBP12.57□□□□□ -0.4
SNX6-203ENST00000555416 SPPL2CQ8IUH8 684 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 GHDCQ8N2G8 530 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 TMEM251Q8N6I4 163 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 CIDECQ96AQ7 238 aaPredicted RBP12.57□□□□□ -0.4
SNX6-203ENST00000555416 BBS4Q96RK4 519 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 SORT1Q99523 831 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 CCT7Q99832 543 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 GLIPR2Q9H4G4 154 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 EML4Q9HC35 981 aaKnown RBP12.57□□□□□ -0.4
SNX6-203ENST00000555416 PLSCR2Q9NRY7 297 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 ENTPD4Q9Y227 616 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 ACTL7BQ9Y614 415 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 NINQ8N4C6 2090 aa12.57□□□□□ -0.4
SNX6-203ENST00000555416 CCL21O00585 134 aa12.56□□□□□ -0.4
SNX6-203ENST00000555416 TM9SF1O15321 606 aa12.56□□□□□ -0.4
SNX6-203ENST00000555416 BIRC5O15392 142 aa12.56□□□□□ -0.4
SNX6-203ENST00000555416 CDC40O60508 579 aaKnown RBP eCLIP12.56□□□□□ -0.4
SNX6-203ENST00000555416 CHEK2O96017 543 aa12.56□□□□□ -0.4
SNX6-203ENST00000555416 ABCB1P08183 1280 aaPredicted RBP12.56□□□□□ -0.4
SNX6-203ENST00000555416 EFNA1P20827 205 aaPredicted RBP12.56□□□□□ -0.4
SNX6-203ENST00000555416 SERPINB5P36952 375 aa12.56□□□□□ -0.4
SNX6-203ENST00000555416 MC3RP41968 323 aa12.56□□□□□ -0.4
SNX6-203ENST00000555416 MAGEA5P43359 124 aa12.56□□□□□ -0.4
SNX6-203ENST00000555416 NCBP2P52298 156 aaKnown RBP eCLIP12.56□□□□□ -0.4
SNX6-203ENST00000555416 PLGLB1Q02325 96 aa12.56□□□□□ -0.4
SNX6-203ENST00000555416 GK5Q6ZS86 529 aa12.56□□□□□ -0.4
SNX6-203ENST00000555416 IKBIPQ70UQ0 350 aa12.56□□□□□ -0.4
SNX6-203ENST00000555416 ZNF551Q7Z340 670 aaPredicted RBP12.56□□□□□ -0.4
SNX6-203ENST00000555416 FAM9CQ8IZT9 166 aa12.56□□□□□ -0.4
SNX6-203ENST00000555416 TAGAPQ8N103 731 aa12.56□□□□□ -0.4
SNX6-203ENST00000555416 FBXW8Q8N3Y1 598 aa12.56□□□□□ -0.4
SNX6-203ENST00000555416 ZNF781Q8N8C0 355 aa12.56□□□□□ -0.4
SNX6-203ENST00000555416 ANKRD42Q8N9B4 389 aa12.56□□□□□ -0.4
SNX6-203ENST00000555416 C17orf47Q8NEP4 570 aa12.56□□□□□ -0.4
SNX6-203ENST00000555416 SPPL2AQ8TCT8 520 aa12.56□□□□□ -0.4
SNX6-203ENST00000555416 NTNG2Q96CW9 530 aa12.56□□□□□ -0.4
SNX6-203ENST00000555416 METTL2AQ96IZ6 378 aaKnown RBP12.56□□□□□ -0.4
SNX6-203ENST00000555416 VSTM2LQ96N03 204 aa12.56□□□□□ -0.4
SNX6-203ENST00000555416 AMDHD1Q96NU7 426 aa12.56□□□□□ -0.4
SNX6-203ENST00000555416 C1orf50Q9BV19 199 aa12.56□□□□□ -0.4
SNX6-203ENST00000555416 ZDHHC11Q9H8X9 412 aa12.56□□□□□ -0.4
SNX6-203ENST00000555416 IL1RL2Q9HB29 575 aa12.56□□□□□ -0.4
SNX6-203ENST00000555416 MIEF1Q9NQG6 463 aa12.56□□□□□ -0.4
SNX6-203ENST00000555416 PLEKHB1Q9UF11 243 aaPredicted RBP12.56□□□□□ -0.4
SNX6-203ENST00000555416 GPR55Q9Y2T6 319 aaPredicted RBP12.56□□□□□ -0.4
SNX6-203ENST00000555416 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.56□□□□□ -0.4
SNX6-203ENST00000555416 A0A1B0GUH1 482 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 TMEM120BA0PK00 339 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 ADAM10O14672 748 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 PLOD3O60568 738 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 HSPA4LO95757 839 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 CT45A8P0DMV1 189 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 CT45A9P0DMV2 189 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 DRD5P21918 477 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 COL8A1P27658 744 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 MPIP34949 423 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 PPICP45877 212 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 ABCE1P61221 599 aaKnown RBP12.55□□□□□ -0.4
SNX6-203ENST00000555416 ADORA2A-AS1P86434 159 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 PDE7AQ13946 482 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 RPS6KA2Q15349 733 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 CT45A2Q5DJT8 189 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 C6orf136Q5SQH8 315 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 FNDC7Q5VTL7 733 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 TMEM107Q6UX40 140 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 WDR53Q7Z5U6 358 aaPredicted RBP12.55□□□□□ -0.4
SNX6-203ENST00000555416 DOLPP1Q86YN1 238 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 SAMD14Q8IZD0 417 aaPredicted RBP12.55□□□□□ -0.4
SNX6-203ENST00000555416 PPP1R14CQ8TAE6 165 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 HGDQ93099 445 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 TLCD1Q96CP7 247 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 OMA1Q96E52 524 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 CCDC120Q96HB5 630 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 MAGED4Q96JG8 741 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 LCORQ96JN0 433 aaPredicted RBP12.55□□□□□ -0.4
SNX6-203ENST00000555416 PPP1R36Q96LQ0 422 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 BTBD9Q96Q07 612 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 NODALQ96S42 347 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 REEP4Q9H6H4 257 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 FOLH1BQ9HBA9 442 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 TMBIM4Q9HC24 238 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 GIMAP4Q9NUV9 329 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 TNFRSF10DQ9UBN6 386 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 WBP11Q9Y2W2 641 aaKnown RBP12.55□□□□□ -0.4
SNX6-203ENST00000555416 PCNX1Q96RV3 2341 aa12.55□□□□□ -0.4
SNX6-203ENST00000555416 DNAJC13O75165 2243 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 C2orf72A6NCS6 295 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 UPK1AO00322 258 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 UGT2B11O75310 529 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 TRIM3O75382 744 aaPredicted RBP12.54□□□□□ -0.4
SNX6-203ENST00000555416 ERLIN1O75477 346 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 PPM1BO75688 479 aa12.54□□□□□ -0.4
SNX6-203ENST00000555416 ZWINTO95229 277 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms