RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 EML4Q9HC35 981 aaKnown RBP12.05□□□□□ -0.48
SHMT2-211ENST00000554310 SH2D2AQ9NP31 389 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 MYNNQ9NPC7 610 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 PLEKHB1Q9UF11 243 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-211ENST00000554310 ENTPD4Q9Y227 616 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 ZNF835Q9Y2P0 537 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 WBP11Q9Y2W2 641 aaKnown RBP12.05□□□□□ -0.48
SHMT2-211ENST00000554310 GTF3C1Q12789 2109 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 EML6Q6ZMW3 1958 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 ZNF407Q9C0G0 2248 aa12.05□□□□□ -0.48
SHMT2-211ENST00000554310 PCNX1Q96RV3 2341 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 CAPN14A8MX76 684 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 SLC28A1O00337 649 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 RGS14O43566 566 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 HS6ST1O60243 411 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 WISP2O76076 250 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 CCL3P10147 92 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 ABOP16442 354 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 DDCP20711 480 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 S1PR1P21453 382 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 CNR1P21554 472 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 GPX3P22352 226 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 NRG3P56975 720 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 PLGLB1Q02325 96 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 BTKQ06187 659 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 MGAT2Q10469 447 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 RPS6KA2Q15349 733 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 CEBPEQ15744 281 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 NTRK2Q16620 822 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 CMPK2Q5EBM0 449 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 CES4AQ5XG92 561 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 CLEC6AQ6EIG7 209 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 MAMDC2Q7Z304 686 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-211ENST00000554310 SPPL2CQ8IUH8 684 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 FBXW8Q8N3Y1 598 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 OR6Y1Q8NGX8 325 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 PPP1R14CQ8TAE6 165 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 ADIPOR1Q96A54 375 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 EXOSC8Q96B26 276 aaKnown RBP12.04□□□□□ -0.48
SHMT2-211ENST00000554310 TMEM120AQ9BXJ8 343 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 TTTY12Q9BZ98 90 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 IL1RL2Q9HB29 575 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 MIEF1Q9NQG6 463 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 PFDN4Q9NQP4 134 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 SLC35C2Q9NQQ7 365 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 SAR1AQ9NR31 198 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 CNIH4Q9P003 139 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 ZNF639Q9UID6 485 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 CCL27Q9Y4X3 112 aa12.04□□□□□ -0.48
SHMT2-211ENST00000554310 POLR3HQ9Y535 204 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-211ENST00000554310 DNAJC13O75165 2243 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 PINLYPA6NC86 204 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 TMEM114B3SHH9 223 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 G3V3Y1 287 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 CCL21O00585 134 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 HNRNPCL1O60812 293 aaKnown RBP12.03□□□□□ -0.48
SHMT2-211ENST00000554310 BCAS2O75934 225 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-211ENST00000554310 GLSO94925 669 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-211ENST00000554310 CBX7O95931 251 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 CHRNGP07510 517 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 PTGER1P34995 402 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 NR0B1P51843 470 aaKnown RBP12.03□□□□□ -0.48
SHMT2-211ENST00000554310 PPIAP62937 165 aaKnown RBP12.03□□□□□ -0.48
SHMT2-211ENST00000554310 HSF1Q00613 529 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 DUSP2Q05923 314 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 LTB4RQ15722 352 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 C3AR1Q16581 482 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 HYAL4Q2M3T9 481 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 ZNF628Q5EBL2 1059 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 TBCELQ5QJ74 424 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 SLC22A10Q63ZE4 541 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 FAM91A1Q658Y4 838 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 NOXRED1Q6NXP6 359 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 ARHGAP11AQ6P4F7 1023 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 FAM111BQ6SJ93 734 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 RPTNQ6XPR3 784 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 CHERPQ8IWX8 916 aaKnown RBP12.03□□□□□ -0.48
SHMT2-211ENST00000554310 FAM9CQ8IZT9 166 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 FAM109AQ8N4B1 249 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 FAM13CQ8NE31 585 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 OR10G3Q8NGC4 313 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 CDC26Q8NHZ8 85 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.03□□□□□ -0.48
SHMT2-211ENST00000554310 SECISBP2Q96T21 854 aaKnown RBP12.03□□□□□ -0.48
SHMT2-211ENST00000554310 CCT7Q99832 543 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 ZDHHC11Q9H8X9 412 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 LRTM1Q9HBL6 345 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 PLSCR2Q9NRY7 297 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 C1orf109Q9NX04 203 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 PRODH2Q9UF12 536 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 BCAP29Q9UHQ4 241 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 SH3BGRL2Q9UJC5 107 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 DCTN4Q9UJW0 460 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 TINAGQ9UJW2 476 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 BOKQ9UMX3 212 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-211ENST00000554310 DNAJC15Q9Y5T4 150 aa12.03□□□□□ -0.48
SHMT2-211ENST00000554310 CHCHD2Q9Y6H1 151 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-211ENST00000554310 NOTCH2Q04721 2471 aa12.02□□□□□ -0.48
SHMT2-211ENST00000554310 A0A0G2JND7 137 aa12.02□□□□□ -0.49
SHMT2-211ENST00000554310 A1L4Q6 167 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms