RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 ERGP11308 486 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 CTNNA2P26232 953 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 BDKRB1P46663 353 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 SLCO1A2P46721 670 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 NAGLUP54802 743 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 EEFSECP57772 596 aaKnown RBP4.65□□□□□ -1.67
CKAP4-203ENST00000553039 ROM1Q03395 351 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 UBXN1Q04323 297 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 LGALS3BPQ08380 585 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 ASPHQ12797 758 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 STX4Q12846 297 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 BIKQ13323 160 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 PMS2P11Q13670 270 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 EFTUD2Q15029 972 aaKnown RBP eCLIP4.65□□□□□ -1.67
CKAP4-203ENST00000553039 ZNF672Q499Z4 452 aaPredicted RBP4.65□□□□□ -1.67
CKAP4-203ENST00000553039 CCSMST1Q4G0I0 132 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 IQCCQ4KMZ1 466 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 AARS2Q5JTZ9 985 aaKnown RBP4.65□□□□□ -1.67
CKAP4-203ENST00000553039 PRAMEF20Q5VT98 475 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 AAGABQ6PD74 315 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 C16orf54Q6UWD8 224 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 BEND4Q6ZU67 534 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 USP43Q70EL4 1123 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 KRT77Q7Z794 578 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 ADGRE4PQ86SQ3 457 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 EXOC3L1Q86VI1 746 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 LRRC6Q86X45 466 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 GPSM1Q86YR5 675 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 ZNF595Q8IYB9 648 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 GCNT2Q8N0V5 402 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 TEX29Q8N6K0 151 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 MFSD9Q8NBP5 474 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 OR14A16Q8NHC5 309 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 NUBPLQ8TB37 319 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 C10orf105Q8TEF2 133 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 P3H4Q92791 437 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 MRPL24Q96A35 216 aaKnown RBP4.65□□□□□ -1.67
CKAP4-203ENST00000553039 SPACA9Q96E40 222 aaPredicted RBP4.65□□□□□ -1.67
CKAP4-203ENST00000553039 PDLIM2Q96JY6 352 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 FAR2Q96K12 515 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 GNRHR2Q96P88 292 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 PKP4Q99569 1192 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 TBL1YQ9BQ87 522 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 APOL2Q9BQE5 337 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 SYT11Q9BT88 431 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 G6PC3Q9BUM1 346 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 TRAF4Q9BUZ4 470 aaPredicted RBP4.65□□□□□ -1.67
CKAP4-203ENST00000553039 TRIM5Q9C035 493 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 OR8D2Q9GZM6 311 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 HAUS4Q9H6D7 363 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 SYNPO2LQ9H987 977 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.65□□□□□ -1.672e-8■■□□□ 12
CKAP4-203ENST00000553039 TAB2Q9NYJ8 693 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 CISD1Q9NZ45 108 aaKnown RBP4.65□□□□□ -1.67
CKAP4-203ENST00000553039 ZNF223Q9UK11 482 aaPredicted RBP4.65□□□□□ -1.67
CKAP4-203ENST00000553039 PROCRQ9UNN8 238 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 RUVBL2Q9Y230 463 aaKnown RBP4.65□□□□□ -1.67
CKAP4-203ENST00000553039 B3GALT5Q9Y2C3 310 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 DLGAP4Q9Y2H0 992 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 CRYL1Q9Y2S2 319 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.65□□□□□ -1.67
CKAP4-203ENST00000553039 MAGED1Q9Y5V3 778 aaPredicted RBP4.65□□□□□ -1.67
CKAP4-203ENST00000553039 WIF1Q9Y5W5 379 aa4.65□□□□□ -1.67
CKAP4-203ENST00000553039 EPN1Q9Y6I3 576 aaPredicted RBP4.65□□□□□ -1.67
CKAP4-203ENST00000553039 HEATR5AQ86XA9 2040 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 GOLGA6L9A6NEM1 432 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 LRRC3CA6NJW4 275 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 IQCF5A8MTL0 148 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 H3BS24 57 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 MYO1CO00159 1063 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 PFDN6O15212 129 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 PSMD3O43242 534 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 OR1F1O43749 312 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 LCMT2O60294 686 aaKnown RBP4.64□□□□□ -1.67
CKAP4-203ENST00000553039 CEP104O60308 925 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 ZNF354AO60765 605 aaPredicted RBP4.64□□□□□ -1.67
CKAP4-203ENST00000553039 CTNSO60931 367 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 CBR3O75828 277 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 PROSCO94903 275 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 CD8AP01732 235 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 ESR1P03372 595 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 CELA3BP08861 270 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 COX7A2P14406 83 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 PSMA3P25788 255 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 ATP5DP30049 168 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 ADMP35318 185 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 MSH2P43246 934 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 KIR2DL2P43627 348 aaPredicted RBP4.64□□□□□ -1.67
CKAP4-203ENST00000553039 ALDH9A1P49189 494 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 TTPAP49638 278 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 CCR8P51685 355 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 ZNF75DP51815 510 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 SNRPNP63162 240 aaKnown RBP4.64□□□□□ -1.67
CKAP4-203ENST00000553039 DYNLT1P63172 113 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 OLR1P78380 273 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 KLHL30Q0D2K2 578 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 FUT7Q11130 342 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 SERTAD2Q14140 314 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 EFR3AQ14156 821 aa4.64□□□□□ -1.67
CKAP4-203ENST00000553039 RPS6KA1Q15418 735 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms