RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 GUCY2DQ02846 1103 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 GTF2H2Q13888 395 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 DAZAP2Q15038 168 aaPredicted RBP6.97□□□□□ -1.29
NEK3-201ENST00000550331 C6orf163Q5TEZ5 329 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 FNDC7Q5VTL7 733 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 NSUN5P2Q63ZY6 315 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 VASNQ6EMK4 673 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 GTF2H2CQ6P1K8 395 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 TMEM81Q6P7N7 255 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 ZDHHC24Q6UX98 284 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 GOLGA7Q7Z5G4 137 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 CAMKMTQ7Z624 323 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 BIVMQ86UB2 503 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 CDC20BQ86Y33 519 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 ZNF615Q8N8J6 731 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 TNIP2Q8NFZ5 429 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 OR7G1Q8NGA0 311 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 GOT1L1Q8NHS2 421 aaPredicted RBP6.97□□□□□ -1.29
NEK3-201ENST00000550331 FBXO25Q8TCJ0 367 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 DOK4Q8TEW6 326 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 ADIPOR1Q96A54 375 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 MBD6Q96DN6 1003 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 HSPBAP1Q96EW2 488 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 RILPQ96NA2 401 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 ALPK1Q96QP1 1244 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 SMR3AQ99954 134 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 GPATCH1Q9BRR8 931 aaKnown RBP6.97□□□□□ -1.29
NEK3-201ENST00000550331 OR10A5Q9H207 317 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 TEX10Q9NXF1 929 aaPredicted RBP6.97□□□□□ -1.29
NEK3-201ENST00000550331 AHSPQ9NZD4 102 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 CRIM1Q9NZV1 1036 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 FETUBQ9UGM5 382 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 ADAM29Q9UKF5 820 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 CBLCQ9ULV8 474 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 C15orf41Q9Y2V0 281 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 RNF11Q9Y3C5 154 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 NPFFR2Q9Y5X5 522 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 ZNF407Q9C0G0 2248 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 COL6A5A8TX70 2615 aa6.97□□□□□ -1.29
NEK3-201ENST00000550331 A0A096LPK6 155 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 HMX2A2RU54 273 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 MBD3L4A6NDZ8 208 aaPredicted RBP6.96□□□□□ -1.3
NEK3-201ENST00000550331 MBD3L3A6NE82 208 aaPredicted RBP6.96□□□□□ -1.3
NEK3-201ENST00000550331 LRRC14BA6NHZ5 514 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 GOLGA6L10A6NI86 522 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 MBD3L5A6NJ08 208 aaPredicted RBP6.96□□□□□ -1.3
NEK3-201ENST00000550331 KIAA1324LA8MWY0 1029 aaPredicted RBP6.96□□□□□ -1.3
NEK3-201ENST00000550331 STX16-NPEPL1H3BU86 382 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 OR7A17O14581 309 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 STX16O14662 325 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 PGRMC2O15173 223 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 GUCY1B2O75343 617 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 TRAPPC6AO75865 159 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 SIX3O95343 332 aaPredicted RBP6.96□□□□□ -1.3
NEK3-201ENST00000550331 CLDN9O95484 217 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 IL18BPO95998 194 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 ACTL6AO96019 429 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 CT62P0C5K7 136 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 FAM157BP0CG42 384 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 CPMP14384 443 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 NAGAP17050 411 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 SERPINB8P50452 374 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 NEK2P51955 445 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 ZNF136P52737 540 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 DGKQP52824 942 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 ADAM8P78325 824 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 SORDQ00796 357 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 C2orf54Q08AI8 447 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 SNTB1Q13884 538 aaKnown RBP6.96□□□□□ -1.3
NEK3-201ENST00000550331 GGTA1PQ4G0N0 100 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 MROH9Q5TGP6 573 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 FRG2Q64ET8 278 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 TIGD3Q6B0B8 471 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 POMZP3Q6PJE2 187 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 PAMR1Q6UXH9 720 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 TMEM64Q6YI46 380 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 PAGE2Q7Z2X7 111 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 CCDC25Q86WR0 208 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 KIF18BQ86Y91 864 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 OR4K14Q8NGD5 310 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 MBD3L2Q8NHZ7 208 aaPredicted RBP6.96□□□□□ -1.3
NEK3-201ENST00000550331 TRPC4APQ8TEL6 797 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 UCN3Q969E3 161 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 GPR78Q96P69 363 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 GNRHR2Q96P88 292 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 FRG2BQ96QU4 278 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 NTMT1Q9BV86 223 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 LIME1Q9H400 295 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 TMCO1Q9UM00 188 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 CFL2Q9Y281 166 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 PLEKHA6Q9Y2H5 1048 aa6.96□□□□□ -1.3
NEK3-201ENST00000550331 HRNRQ86YZ3 2850 aaPredicted RBP6.96□□□□□ -1.3
NEK3-201ENST00000550331 A0A1W2PS29 197 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 C1orf226A1L170 272 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 TUBAL3A6NHL2 446 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 KDM4EB2RXH2 506 aaPredicted RBP6.95□□□□□ -1.3
NEK3-201ENST00000550331 PPM1BO75688 479 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 ACSL3O95573 720 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 RAF1P04049 648 aa6.95□□□□□ -1.3
NEK3-201ENST00000550331 GBAP04062 536 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms