RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 ENDOUP21128 410 aaKnown RBP8.98□□□□□ -0.97
HDAC7-229ENST00000549883 PRPH2P23942 346 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 MC3RP41968 323 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 SERPINB4P48594 390 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 NAA20P61599 178 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 RPL38P63173 70 aaKnown RBP8.98□□□□□ -0.97
HDAC7-229ENST00000549883 KCNJ2P63252 427 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 RBPJQ06330 500 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 HEPACAMQ14CZ8 416 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 SH2D4BQ5SQS7 431 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 FNDC7Q5VTL7 733 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 HLA-DQA1Q5Y7H0 255 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 GK5Q6ZS86 529 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 CD163Q86VB7 1156 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 FBXW8Q8N3Y1 598 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 OR4N2Q8NGD1 307 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 FAM57AQ8TBR7 257 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 SPPL2AQ8TCT8 520 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 ZNF675Q8TD23 568 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 TWIST2Q8WVJ9 160 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 DIO2Q92813 273 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 HGDQ93099 445 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 TP53INP1Q96A56 240 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 CIDECQ96AQ7 238 aaPredicted RBP8.98□□□□□ -0.97
HDAC7-229ENST00000549883 NTNG2Q96CW9 530 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 FCRL1Q96LA6 429 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 JSRP1Q96MG2 331 aaPredicted RBP8.98□□□□□ -0.97
HDAC7-229ENST00000549883 TSSK3Q96PN8 268 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 NODALQ96S42 347 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 C20orf27Q9GZN8 174 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 CENPHQ9H3R5 247 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 GLIPR2Q9H4G4 154 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 IL1RL2Q9HB29 575 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 C1orf109Q9NX04 203 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 SPRR3Q9UBC9 169 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 MID2Q9UJV3 735 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 PSME2Q9UL46 239 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 MEMO1Q9Y316 297 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 ARHGAP21Q5T5U3 1957 aa8.98□□□□□ -0.97
HDAC7-229ENST00000549883 B4DXG7 233 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 NPIPA2E9PIF3 369 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 NPIPB8E9PQR5 432 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 NPIPA3F8WFD2 350 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 H3BQF6 201 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 SLC28A1O00337 649 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 CTIFO43310 598 aaKnown RBP8.97□□□□□ -0.97
HDAC7-229ENST00000549883 UGT2B11O75310 529 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 TRIM3O75382 744 aaPredicted RBP8.97□□□□□ -0.97
HDAC7-229ENST00000549883 SKAP2O75563 359 aaPredicted RBP8.97□□□□□ -0.97
HDAC7-229ENST00000549883 PPM1BO75688 479 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 IGHG3P01860 377 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 TPOP07202 933 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 DHRS4L1P0CG22 281 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 CT45A8P0DMV1 189 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 CT45A9P0DMV2 189 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 PTGS2P35354 604 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 DCTP40126 519 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 PTGDSP41222 190 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 CASP3P42574 277 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 TRPC1P48995 793 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 NCBP2P52298 156 aaKnown RBP eCLIP8.97□□□□□ -0.97
HDAC7-229ENST00000549883 PER3P56645 1201 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 RPS6KA2Q15349 733 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 GALNTL6Q49A17 601 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 CT45A2Q5DJT8 189 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 XKR7Q5GH72 579 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 C6orf163Q5TEZ5 329 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 TMEM107Q6UX40 140 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 TRILQ7L0X0 811 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 ZNF551Q7Z340 670 aaPredicted RBP8.97□□□□□ -0.97
HDAC7-229ENST00000549883 MRGPRGQ86SM5 289 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 SLC22A16Q86VW1 577 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 DDIASQ8IXT1 998 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 FAM9CQ8IZT9 166 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 CLYBLQ8N0X4 340 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 TAGAPQ8N103 731 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 FAM109AQ8N4B1 249 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 OR5M9Q8NGP3 310 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 OMA1Q96E52 524 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 LCORQ96JN0 433 aaPredicted RBP8.97□□□□□ -0.97
HDAC7-229ENST00000549883 VSTM2LQ96N03 204 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 RILPQ96NA2 401 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 AMDHD1Q96NU7 426 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 BBS4Q96RK4 519 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 DMRTA2Q96SC8 542 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 TRMOQ9BU70 441 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 DOHHQ9BU89 302 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 SLC6A15Q9H2J7 730 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 ZNF703Q9H7S9 590 aaPredicted RBP8.97□□□□□ -0.97
HDAC7-229ENST00000549883 FOLH1BQ9HBA9 442 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 GALNT9Q9HCQ5 603 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 MIEF1Q9NQG6 463 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 PNPLA3Q9NST1 481 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 CNIH4Q9P003 139 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 ENTPD4Q9Y227 616 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 GPR55Q9Y2T6 319 aaPredicted RBP8.97□□□□□ -0.97
HDAC7-229ENST00000549883 NAV2Q8IVL1 2488 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 HCFC1P51610 2035 aa8.97□□□□□ -0.97
HDAC7-229ENST00000549883 PKDREJQ9NTG1 2253 aa8.96□□□□□ -0.97
HDAC7-229ENST00000549883 KDM4EB2RXH2 506 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms