RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 OR4K5Q8NGD3 323 aa17.42■□□□□ 0.38
PRPF40B-208ENST00000548436 MCFD2Q8NI22 146 aa17.42■□□□□ 0.38
PRPF40B-208ENST00000548436 MRGPRX1Q96LB2 322 aa17.42■□□□□ 0.38
PRPF40B-208ENST00000548436 WDR92Q96MX6 357 aa17.42■□□□□ 0.38
PRPF40B-208ENST00000548436 GPA33Q99795 319 aa17.42■□□□□ 0.38
PRPF40B-208ENST00000548436 PRR14Q9BWN1 585 aa17.42■□□□□ 0.38
PRPF40B-208ENST00000548436 SRMSQ9H3Y6 488 aa17.42■□□□□ 0.38
PRPF40B-208ENST00000548436 NCKAP1Q9Y2A7 1128 aa17.42■□□□□ 0.38
PRPF40B-208ENST00000548436 PIPP12273 146 aaPredicted RBP17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 NDUFS1P28331 727 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 ACTR1BP42025 376 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 ACTR1AP61163 376 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 RPS15AP62244 130 aaKnown RBP17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 TFF2Q03403 129 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 GNA13Q14344 377 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 MED22Q15528 200 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 TMEM201Q5SNT2 666 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 USP30Q70CQ3 517 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 USP43Q70EL4 1123 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 BCDIN3DQ7Z5W3 292 aaKnown RBP17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 ZNF554Q86TJ5 538 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 IQCHQ86VS3 1027 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 NRROSQ86YC3 692 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 IQCF1Q8N6M8 205 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 GAL3ST3Q96A11 431 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 PPP1R14BQ96C90 147 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 C10orf90Q96M02 699 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 PRRC1Q96M27 445 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 SLC6A18Q96N87 628 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 CENPOQ9BU64 300 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 PINK1Q9BXM7 581 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 SLC38A1Q9H2H9 487 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 DSN1Q9H410 356 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 GIMAP4Q9NUV9 329 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 DNAAF2Q9NVR5 837 aaKnown RBP17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 LYARQ9NX58 379 aaKnown RBP17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 MSRAQ9UJ68 235 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 PCOLCE2Q9UKZ9 415 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 EYSQ5T1H1 3165 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 LRP4O75096 1905 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 METTL15A6NJ78 407 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 CASC3O15234 703 aaKnown RBP17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 NR2F6P10588 404 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 OLR1P78380 273 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 CHRNEQ04844 493 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 HTR4Q13639 388 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 CASP12Q6UXS9 341 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 MTSS1LQ765P7 747 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 ASPGQ86U10 573 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 CACTIN-AS1Q8N1I8 211 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 TCEANCQ8N8B7 351 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 WDR36Q8NI36 951 aaKnown RBP17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 GIMAP5Q96F15 307 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 MGLLQ99685 303 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 C3orf14Q9HBI5 128 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 ZNF780BQ9Y6R6 833 aa17.41■□□□□ 0.38
PRPF40B-208ENST00000548436 DSCR3O14972 297 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 RASGRP1O95267 797 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 DBTP11182 482 aaKnown RBP17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 MAGP20916 626 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 TGM3Q08188 693 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 ZNF404Q494X3 552 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 PRRT3Q5FWE3 981 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 PERM1Q5SV97 790 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 PRAMEF8Q5VWM4 474 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 PRAMEF7Q5VXH5 474 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 CD300LDQ6UXZ3 194 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 VRK2Q86Y07 508 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 NT5CQ8TCD5 201 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 KLHL6Q8WZ60 621 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 OR2A14Q96R47 310 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 CHCHD6Q9BRQ6 235 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 POLMQ9NP87 494 aaPredicted RBP17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 GPR55Q9Y2T6 319 aaPredicted RBP17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 A6NCN8 305 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 P2RX6O15547 441 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 FRS3O43559 492 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 CTSVO60911 334 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 DNAJB6O75190 326 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 ACADMP11310 421 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 ALDH6A1Q02252 535 aaKnown RBP17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 RGS1Q08116 209 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 TSTQ16762 297 aaKnown RBP17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 ZNF311Q5JNZ3 666 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 C1orf94Q6P1W5 598 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 C19orf48Q6RUI8 117 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 KIAA1324Q6UXG2 1013 aaKnown RBP17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 OR8J1Q8NGP2 316 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 Q96MT0 163 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 DACH2Q96NX9 599 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 CHST2Q9Y4C5 530 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 KLK4Q9Y5K2 254 aa17.4■□□□□ 0.38
PRPF40B-208ENST00000548436 COL4A2P08572 1712 aa17.39■□□□□ 0.38
PRPF40B-208ENST00000548436 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.39■□□□□ 0.37
PRPF40B-208ENST00000548436 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.39■□□□□ 0.37
PRPF40B-208ENST00000548436 FUOMA2VDF0 154 aa17.39■□□□□ 0.37
PRPF40B-208ENST00000548436 PRKYO43930 277 aa17.39■□□□□ 0.37
PRPF40B-208ENST00000548436 ZIC2O95409 532 aaPredicted RBP17.39■□□□□ 0.37
PRPF40B-208ENST00000548436 APBB3O95704 486 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms