RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 EGLN2Q96KS0 407 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 FCRL1Q96LA6 429 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 DOHHQ9BU89 302 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 DEFB127Q9H1M4 99 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 TUBA8Q9NY65 449 aaPredicted RBP14.47□□□□□ -0.09
CCDC78-216ENST00000544996 TAS2R9Q9NYW1 312 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 ZDHHC2Q9UIJ5 367 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 DTX4Q9Y2E6 619 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 POLEQ07864 2286 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 FLNBO75369 2602 aaKnown RBP14.46□□□□□ -0.09
CCDC78-216ENST00000544996 LRRK2Q5S007 2527 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 A0A1B0GTH9 108 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 A1L4Q6 167 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 FRG2CA6NGY1 282 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 COQ9O75208 318 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 PPM1BO75688 479 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 PDE9AO76083 593 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 DHRS4L1P0CG22 281 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 SDC1P18827 310 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 ARRB2P32121 409 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 PTGS2P35354 604 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 SOX18P35713 384 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 ABCE1P61221 599 aaKnown RBP14.46□□□□□ -0.09
CCDC78-216ENST00000544996 PSPHP78330 225 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 PLCXD2Q0VAA5 305 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 FOXO1Q12778 655 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 DUSP8Q13202 625 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 SLC10A1Q14973 349 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 NNATQ16517 81 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 C3AR1Q16581 482 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 HYAL4Q2M3T9 481 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 HHATQ5VTY9 493 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 PRR22Q8IZ63 422 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 KIRREL3Q8IZU9 778 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 EID3Q8N140 333 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 FAM109AQ8N4B1 249 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 OR7G2Q8NG99 324 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 SPPL2AQ8TCT8 520 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 GFM2Q969S9 779 aaKnown RBP14.46□□□□□ -0.09
CCDC78-216ENST00000544996 PPCDCQ96CD2 204 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 ZNF764Q96H86 408 aaPredicted RBP14.46□□□□□ -0.09
CCDC78-216ENST00000544996 JSRP1Q96MG2 331 aaPredicted RBP14.46□□□□□ -0.09
CCDC78-216ENST00000544996 TSSK3Q96PN8 268 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 PAIP2Q9BPZ3 127 aaKnown RBP14.46□□□□□ -0.09
CCDC78-216ENST00000544996 REEP4Q9H6H4 257 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 ZDHHC11Q9H8X9 412 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 ZFP64Q9NPA5 681 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 B4GALT7Q9UBV7 327 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 PLEKHB1Q9UF11 243 aaPredicted RBP14.46□□□□□ -0.09
CCDC78-216ENST00000544996 TINAGQ9UJW2 476 aa14.46□□□□□ -0.09
CCDC78-216ENST00000544996 EXO1Q9UQ84 846 aaKnown RBP14.46□□□□□ -0.09
CCDC78-216ENST00000544996 GPR55Q9Y2T6 319 aaPredicted RBP14.46□□□□□ -0.09
CCDC78-216ENST00000544996 A0A087WV62 115 aa14.45□□□□□ -0.1
CCDC78-216ENST00000544996 ATP6AP2A0A1C7CYW4 349 aa14.45□□□□□ -0.1
CCDC78-216ENST00000544996 AKAP10O43572 662 aa14.45□□□□□ -0.1
CCDC78-216ENST00000544996 ZG16O60844 167 aa14.45□□□□□ -0.1
CCDC78-216ENST00000544996 PEX11AO75192 247 aa14.45□□□□□ -0.1
CCDC78-216ENST00000544996 SKAP2O75563 359 aaPredicted RBP14.45□□□□□ -0.1
CCDC78-216ENST00000544996 ATP6AP2O75787 350 aa14.45□□□□□ -0.1
CCDC78-216ENST00000544996 SNX4O95219 450 aa14.45□□□□□ -0.1
CCDC78-216ENST00000544996 LRATO95237 230 aa14.45□□□□□ -0.1
CCDC78-216ENST00000544996 MAGEA5P43359 124 aa14.45□□□□□ -0.1
CCDC78-216ENST00000544996 MPP2Q14168 576 aa14.45□□□□□ -0.1
CCDC78-216ENST00000544996 XKR7Q5GH72 579 aa14.45□□□□□ -0.1
CCDC78-216ENST00000544996 TMEM198Q66K66 360 aa14.45□□□□□ -0.1
CCDC78-216ENST00000544996 NUP54Q7Z3B4 507 aa14.45□□□□□ -0.1
CCDC78-216ENST00000544996 R3HCC1LQ7Z5L2 792 aaKnown RBP14.45□□□□□ -0.1
CCDC78-216ENST00000544996 PACS2Q86VP3 889 aa14.45□□□□□ -0.1
CCDC78-216ENST00000544996 TMEM251Q8N6I4 163 aa14.45□□□□□ -0.1
CCDC78-216ENST00000544996 MTERF3Q96E29 417 aa14.45□□□□□ -0.1
CCDC78-216ENST00000544996 OMA1Q96E52 524 aa14.45□□□□□ -0.1
CCDC78-216ENST00000544996 AMDHD1Q96NU7 426 aa14.45□□□□□ -0.1
CCDC78-216ENST00000544996 BTBD9Q96Q07 612 aa14.45□□□□□ -0.1
CCDC78-216ENST00000544996 GLIPR2Q9H4G4 154 aa14.45□□□□□ -0.1
CCDC78-216ENST00000544996 ANKRA2Q9H9E1 313 aa14.45□□□□□ -0.1
CCDC78-216ENST00000544996 PLSCR2Q9NRY7 297 aa14.45□□□□□ -0.1
CCDC78-216ENST00000544996 DDX18Q9NVP1 670 aaKnown RBP14.45□□□□□ -0.1
CCDC78-216ENST00000544996 SH3BP4Q9P0V3 963 aa14.45□□□□□ -0.1
CCDC78-216ENST00000544996 BAIAP2L1Q9UHR4 511 aa14.45□□□□□ -0.1
CCDC78-216ENST00000544996 CNOT11Q9UKZ1 510 aaKnown RBP14.45□□□□□ -0.1
CCDC78-216ENST00000544996 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.45□□□□□ -0.1
CCDC78-216ENST00000544996 SVILO95425 2214 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 PLOD2O00469 737 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 TO15178 435 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 PDPK1O15530 556 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 ITM2AO43736 263 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 TBX19O60806 448 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 ERN1O75460 977 aaKnown RBP14.44□□□□□ -0.1
CCDC78-216ENST00000544996 LYPLA1O75608 230 aaPredicted RBP14.44□□□□□ -0.1
CCDC78-216ENST00000544996 TPOP07202 933 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 ABCB1P08183 1280 aaPredicted RBP14.44□□□□□ -0.1
CCDC78-216ENST00000544996 BCKDHAP12694 445 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 KRT20P35900 424 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 HPCAL1P37235 193 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 RPL3P39023 403 aaKnown RBP14.44□□□□□ -0.1
CCDC78-216ENST00000544996 MC3RP41968 323 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 SLC1A6P48664 564 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 MASP1P48740 699 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 STX3Q13277 289 aa14.44□□□□□ -0.1
CCDC78-216ENST00000544996 PRSS53Q2L4Q9 553 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms