RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 GPR151Q8TDV0 419 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 DNASE2BQ8WZ79 361 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 OTULINQ96BN8 352 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 KCTD12Q96CX2 325 aaKnown RBP9.85□□□□□ -0.83
CHFR-219ENST00000541341 DIRAS2Q96HU8 199 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 DCBLD2Q96PD2 775 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 MCCC1Q96RQ3 725 aaPredicted RBP9.85□□□□□ -0.83
CHFR-219ENST00000541341 LYSMD1Q96S90 227 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 COPS8Q99627 209 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 INPP5KQ9BT40 448 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 CNPPD1Q9BV87 410 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 ALOXE3Q9BYJ1 711 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 UCK2Q9BZX2 261 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 POLR2J2Q9GZM3 115 aaKnown RBP9.85□□□□□ -0.83
CHFR-219ENST00000541341 PIGUQ9H490 435 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 SLC25A19Q9HC21 320 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 ATP13A2Q9NQ11 1180 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 GPR83Q9NYM4 423 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 ZNF226Q9NYT6 803 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 NDUFAF4Q9P032 175 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 SLC25A13Q9UJS0 675 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 DIMT1Q9UNQ2 313 aaKnown RBP9.85□□□□□ -0.83
CHFR-219ENST00000541341 ANKRD11Q6UB99 2663 aaPredicted RBP9.85□□□□□ -0.83
CHFR-219ENST00000541341 COL5A1P20908 1838 aaPredicted RBP9.84□□□□□ -0.83
CHFR-219ENST00000541341 KCNE1BA0A087WTH5 132 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 FAM240BA0A1B0GVZ2 78 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 TMEM129A0AVI4 362 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 FAM221BA6H8Z2 402 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 OR6C70A6NIJ9 312 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 B4DXG7 233 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 ZNF780AO75290 641 aaPredicted RBP9.84□□□□□ -0.83
CHFR-219ENST00000541341 OR2B3O76000 313 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 CPSF4O95639 269 aaKnown RBP9.84□□□□□ -0.83
CHFR-219ENST00000541341 CER1O95813 267 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 PTHP01270 115 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 IFNA7P01567 189 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 PIRTP0C851 137 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 SRCP12931 536 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 CPEP16870 476 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 POLR2CP19387 275 aaPredicted RBP9.84□□□□□ -0.83
CHFR-219ENST00000541341 CBLP22681 906 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 TALDO1P37837 337 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 CTSOP43234 321 aaPredicted RBP9.84□□□□□ -0.83
CHFR-219ENST00000541341 XCR1P46094 333 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 ATP12AP54707 1039 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 RAG2P55895 527 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 RAB14P61106 215 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 BCL2L1Q07817 233 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 HSPA14Q0VDF9 509 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 SLC14A1Q13336 389 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 TP53BP2Q13625 1128 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 PTPRCAPQ14761 206 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 HEPACAMQ14CZ8 416 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 PTGES3Q15185 160 aaKnown RBP9.84□□□□□ -0.83
CHFR-219ENST00000541341 TRAM1Q15629 374 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 SOWAHCQ53LP3 525 aaPredicted RBP9.84□□□□□ -0.83
CHFR-219ENST00000541341 PYDC2Q56P42 97 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 C3orf38Q5JPI3 329 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 GRHL2Q6ISB3 625 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 CD300LDQ6UXZ3 194 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 PRICKLE2Q7Z3G6 844 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 CCDC71Q8IV32 467 aaPredicted RBP9.84□□□□□ -0.83
CHFR-219ENST00000541341 IQCF2Q8IXL9 164 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 GHDCQ8N2G8 530 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 FAM26EQ8N5C1 309 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 TMEM163Q8TC26 289 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 GANCQ8TET4 914 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 CREB3L4Q8TEY5 395 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 AKAP1Q92667 903 aaKnown RBP eCLIP9.84□□□□□ -0.834e-6■■■■□ 21.3
CHFR-219ENST00000541341 RFKQ969G6 155 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 ESAMQ96AP7 390 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 RNF170Q96K19 258 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 EXOC2Q96KP1 924 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 APOLD1Q96LR9 279 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 QRFPRQ96P65 431 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 BBC3Q96PG8 261 aaPredicted RBP9.84□□□□□ -0.83
CHFR-219ENST00000541341 KCNS3Q9BQ31 491 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 C7orf50Q9BRJ6 194 aaKnown RBP9.84□□□□□ -0.83
CHFR-219ENST00000541341 ACTR6Q9GZN1 396 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 CHST8Q9H2A9 424 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 MRPS18AQ9NVS2 196 aaKnown RBP9.84□□□□□ -0.83
CHFR-219ENST00000541341 ERVK13-1Q9NX77 482 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 AHSPQ9NZD4 102 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 TNFRSF10DQ9UBN6 386 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 GLS2Q9UI32 602 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 TEKT2Q9UIF3 430 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 PPT2Q9UMR5 302 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 POLHQ9Y253 713 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 SNX8Q9Y5X2 465 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 V9GYH0 126 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 ATRXP46100 2492 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 KNL1Q8NG31 2342 aa9.84□□□□□ -0.83
CHFR-219ENST00000541341 LRRK1Q38SD2 2015 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 CABIN1Q9Y6J0 2220 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 A0A1B0GVI7 797 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 A0A1W2PQ09 198 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 C1orf226A1L170 272 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 LINC00862A6NCI5 91 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 C5orf58C9J3I9 102 aa9.83□□□□□ -0.84
CHFR-219ENST00000541341 H0Y8X5 98 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms