RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 TM9SF4Q92544 642 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 NELL1Q92832 810 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 FCRL1Q96LA6 429 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 NLNQ9BYT8 704 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 PBX4Q9BYU1 374 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 DPAGT1Q9H3H5 408 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 NDUFAF4Q9P032 175 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 COX16Q9P0S2 106 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 AFF4Q9UHB7 1163 aaKnown RBP8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 YARS2Q9Y2Z4 477 aaKnown RBP8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 NUBP2Q9Y5Y2 271 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 HIDE1A8MVS5 230 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 CDC7O00311 574 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 KPNA3O00505 521 aaPredicted RBP8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 GRM6O15303 877 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 IL6P05231 212 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 TFPIP10646 304 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 SPI1P17947 270 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 PAICSP22234 425 aaKnown RBP8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 ACSL1P33121 698 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 HTR6P50406 440 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 HSD17B7P56937 341 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 MLLT11Q13015 90 aaPredicted RBP8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 ALKBH1Q13686 389 aaKnown RBP8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 RAB33AQ14088 237 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 HLXQ14774 488 aaPredicted RBP8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 GSG1Q2KHT4 349 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 MPPE1Q53F39 396 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 FAM76BQ5HYJ3 339 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 OR2B11Q5JQS5 317 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 ACER2Q5QJU3 275 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 AVPI1Q5T686 147 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 PRAMEF13Q5VWM6 474 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 PDZD4Q76G19 769 aaPredicted RBP8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 BHLHA9Q7RTU4 235 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 ZNF551Q7Z340 670 aaPredicted RBP8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 DEFB106AQ8N104 65 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 BPIFCQ8NFQ6 507 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 OR4A15Q8NGL6 344 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 RHEBL1Q8TAI7 183 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 PFDN5Q99471 154 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 SEBOXQ9HB31 216 aaPredicted RBP8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 ZNF334Q9HCZ1 680 aaPredicted RBP8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 CLN6Q9NWW5 311 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 GALPQ9UBC7 116 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 GHRLQ9UBU3 117 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 ATXN7L1Q9ULK2 861 aaPredicted RBP8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 CRYL1Q9Y2S2 319 aa8.97□□□□□ -0.97
CTNNA1-243ENST00000540387 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 FAM72CH0Y354 149 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 STMND1H3BQB6 276 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 GPR31O00270 319 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 VEGFDO43915 354 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 RECKO95980 971 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 HPP00738 406 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 PIPP12273 146 aaPredicted RBP8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 SDHBP21912 280 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 IRS1P35568 1242 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 SULT1E1P49888 294 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 ACTR1AP61163 376 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 PITX1P78337 314 aaPredicted RBP8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 DHODHQ02127 395 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 ABHD18Q0P651 414 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 TOMM20Q15388 145 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 SEC23BQ15437 767 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 EIF2S3LQ2VIR3 472 aaKnown RBP8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 FAM72AQ5TYM5 149 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 PLPP4Q5VZY2 271 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 B3GNTL1Q67FW5 361 aaPredicted RBP8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 FAM72DQ6L9T8 149 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 PAQR6Q6TCH4 344 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 KDELC2Q7Z4H8 507 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 FGD2Q7Z6J4 655 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 FAM72BQ86X60 149 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 CILP2Q8IUL8 1156 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 KLHL36Q8N4N3 616 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 PLA2G15Q8NCC3 412 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 OR14A16Q8NHC5 309 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 NR4A3Q92570 626 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 C11orf24Q96F05 449 aaPredicted RBP8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 CDK15Q96Q40 435 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 OR52E6Q96RD3 313 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 SPSB2Q99619 263 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 ATF6BQ99941 703 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 NIPSNAP1Q9BPW8 284 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 YIPF4Q9BSR8 244 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 CHIAQ9BZP6 476 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 ATXN3LQ9H3M9 355 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 SYNDIG1Q9H7V2 258 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 OR6C2Q9NZP2 312 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 CHST2Q9Y4C5 530 aa8.96□□□□□ -0.97
CTNNA1-243ENST00000540387 PDE4DIPQ5VU43 2346 aa8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 TNRC18O15417 2968 aaPredicted RBP8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 OR6C68A6NDL8 312 aa8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 C5orf67F2Z3F1 127 aa8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 WNT9AO14904 365 aa8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 LY86O95711 162 aa8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 ALPIP09923 528 aa8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 DRD2P14416 443 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms