RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 PDPK1O15530 556 aa19.15■□□□□ 0.66
TMEM260-203ENST00000539559 CD8BP10966 210 aa19.15■□□□□ 0.66
TMEM260-203ENST00000539559 CPN2P22792 545 aa19.15■□□□□ 0.66
TMEM260-203ENST00000539559 QSOX2Q6ZRP7 698 aa19.15■□□□□ 0.66
TMEM260-203ENST00000539559 OR4F15Q8NGB8 312 aa19.15■□□□□ 0.66
TMEM260-203ENST00000539559 TEFMQ96QE5 360 aaKnown RBP19.15■□□□□ 0.66
TMEM260-203ENST00000539559 ZBP1Q9H171 429 aa19.15■□□□□ 0.66
TMEM260-203ENST00000539559 PPP1R3EQ9H7J1 279 aa19.15■□□□□ 0.66
TMEM260-203ENST00000539559 TEX10Q9NXF1 929 aaPredicted RBP19.15■□□□□ 0.66
TMEM260-203ENST00000539559 CNIH4Q9P003 139 aa19.15■□□□□ 0.66
TMEM260-203ENST00000539559 A0A0C4DFX4 3053 aa19.14■□□□□ 0.66
TMEM260-203ENST00000539559 LYRM1O43325 122 aa19.14■□□□□ 0.65
TMEM260-203ENST00000539559 PLOD3O60568 738 aa19.14■□□□□ 0.65
TMEM260-203ENST00000539559 EPPINO95925 133 aa19.14■□□□□ 0.65
TMEM260-203ENST00000539559 ELFN1P0C7U0 828 aa19.14■□□□□ 0.65
TMEM260-203ENST00000539559 SLC6A11P48066 632 aa19.14■□□□□ 0.65
TMEM260-203ENST00000539559 VN1R2Q8NFZ6 395 aa19.14■□□□□ 0.65
TMEM260-203ENST00000539559 KLK6Q92876 244 aa19.14■□□□□ 0.65
TMEM260-203ENST00000539559 UFD1Q92890 307 aa19.14■□□□□ 0.65
TMEM260-203ENST00000539559 TM4SF18Q96CE8 201 aa19.14■□□□□ 0.65
TMEM260-203ENST00000539559 TRIM45Q9H8W5 580 aaPredicted RBP19.14■□□□□ 0.65
TMEM260-203ENST00000539559 IL23AQ9NPF7 189 aa19.14■□□□□ 0.65
TMEM260-203ENST00000539559 SEC14L5O43304 696 aa19.14■□□□□ 0.65
TMEM260-203ENST00000539559 TGM5O43548 720 aa19.14■□□□□ 0.65
TMEM260-203ENST00000539559 LIMS3P0CW19 117 aa19.14■□□□□ 0.65
TMEM260-203ENST00000539559 LIMS4P0CW20 117 aa19.14■□□□□ 0.65
TMEM260-203ENST00000539559 DDCP20711 480 aa19.14■□□□□ 0.65
TMEM260-203ENST00000539559 ZNF791Q3KP31 576 aaPredicted RBP19.14■□□□□ 0.65
TMEM260-203ENST00000539559 LAMTOR1Q6IAA8 161 aa19.14■□□□□ 0.65
TMEM260-203ENST00000539559 LRRC56Q8IYG6 542 aaPredicted RBP19.14■□□□□ 0.65
TMEM260-203ENST00000539559 C7orf57Q8NEG2 295 aa19.14■□□□□ 0.65
TMEM260-203ENST00000539559 OR8D4Q8NGM9 314 aa19.14■□□□□ 0.65
TMEM260-203ENST00000539559 ZNF717Q9BY31 904 aaPredicted RBP19.14■□□□□ 0.65
TMEM260-203ENST00000539559 OR51I1Q9H343 314 aa19.14■□□□□ 0.65
TMEM260-203ENST00000539559 RBFOX1Q9NWB1 397 aaKnown RBP19.14■□□□□ 0.65
TMEM260-203ENST00000539559 PCYT1BQ9Y5K3 369 aaPredicted RBP19.14■□□□□ 0.65
TMEM260-203ENST00000539559 GLOD5A6NK44 160 aa19.13■□□□□ 0.65
TMEM260-203ENST00000539559 ICMTO60725 284 aa19.13■□□□□ 0.65
TMEM260-203ENST00000539559 HLA-DMAP28067 261 aa19.13■□□□□ 0.65
TMEM260-203ENST00000539559 ERP29P30040 261 aaKnown RBP19.13■□□□□ 0.65
TMEM260-203ENST00000539559 ADIPOR2Q86V24 386 aa19.13■□□□□ 0.65
TMEM260-203ENST00000539559 TCTE3Q8IZS6 198 aa19.13■□□□□ 0.65
TMEM260-203ENST00000539559 GALNT6Q8NCL4 622 aa19.13■□□□□ 0.65
TMEM260-203ENST00000539559 SMPDL3AQ92484 453 aa19.13■□□□□ 0.65
TMEM260-203ENST00000539559 TRIM63Q969Q1 353 aa19.13■□□□□ 0.65
TMEM260-203ENST00000539559 TIFAQ96CG3 184 aa19.13■□□□□ 0.65
TMEM260-203ENST00000539559 CLIP3Q96DZ5 547 aa19.13■□□□□ 0.65
TMEM260-203ENST00000539559 CUEDC1Q9NWM3 386 aaPredicted RBP19.13■□□□□ 0.65
TMEM260-203ENST00000539559 HRO43593 1189 aa19.13■□□□□ 0.65
TMEM260-203ENST00000539559 OR2B3O76000 313 aa19.13■□□□□ 0.65
TMEM260-203ENST00000539559 NR2F1P10589 423 aa19.13■□□□□ 0.65
TMEM260-203ENST00000539559 CELP19835 753 aa19.13■□□□□ 0.65
TMEM260-203ENST00000539559 PSMB5P28074 263 aa19.13■□□□□ 0.65
TMEM260-203ENST00000539559 BUD31P41223 144 aaPredicted RBP19.13■□□□□ 0.65
TMEM260-203ENST00000539559 CCT3P49368 545 aaKnown RBP19.13■□□□□ 0.65
TMEM260-203ENST00000539559 AGFG1P52594 562 aaKnown RBP19.13■□□□□ 0.65
TMEM260-203ENST00000539559 PNLIPRP1P54315 467 aa19.13■□□□□ 0.65
TMEM260-203ENST00000539559 DCDC1P59894 354 aa19.13■□□□□ 0.65
TMEM260-203ENST00000539559 ZNF57Q68EA5 555 aaPredicted RBP19.13■□□□□ 0.65
TMEM260-203ENST00000539559 MARCH9Q86YJ5 346 aa19.13■□□□□ 0.65
TMEM260-203ENST00000539559 PEX5LQ8IYB4 626 aa19.13■□□□□ 0.65
TMEM260-203ENST00000539559 SIX5Q8N196 739 aa19.13■□□□□ 0.65
TMEM260-203ENST00000539559 ANKRD53Q8N9V6 530 aa19.13■□□□□ 0.65
TMEM260-203ENST00000539559 RASSF5Q8WWW0 418 aa19.13■□□□□ 0.65
TMEM260-203ENST00000539559 ATF6BQ99941 703 aa19.13■□□□□ 0.65
TMEM260-203ENST00000539559 ICKQ9UPZ9 632 aa19.13■□□□□ 0.65
TMEM260-203ENST00000539559 MMP20O60882 483 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 PLXNA2O75051 1894 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 CRYZL1O95825 349 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 LRG1P02750 347 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 LIPIQ6XZB0 460 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 ELMOD2Q8IZ81 293 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 OR5AR1Q8NGP9 310 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 FGF11Q92914 225 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 WDR34Q96EX3 536 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 SAP130Q9H0E3 1048 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 TEKT2Q9UIF3 430 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 CLCA2Q9UQC9 943 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 GTPBP1O00178 669 aaKnown RBP19.12■□□□□ 0.65
TMEM260-203ENST00000539559 TMPRSS11DO60235 418 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 MTNR1AP48039 350 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 RAB8AP61006 207 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 CDK5Q00535 292 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 PRAMEF14Q5SWL7 426 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 PRAMEF13Q5VWM6 474 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 KIAA1161Q6NSJ0 714 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 IL20RBQ6UXL0 311 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 ASB18Q6ZVZ8 466 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 OR5P2Q8WZ92 322 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 ART5Q96L15 291 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 QRFPRQ96P65 431 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 ZNF607Q96SK3 696 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 GON7Q9BXV9 100 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 HCFC1R1Q9NWW0 138 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 ACAD8Q9UKU7 415 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 GSTK1Q9Y2Q3 226 aa19.12■□□□□ 0.65
TMEM260-203ENST00000539559 KIAA0100Q14667 2235 aaKnown RBP19.11■□□□□ 0.65
TMEM260-203ENST00000539559 ZSCAN5BA6NJL1 495 aa19.11■□□□□ 0.65
TMEM260-203ENST00000539559 CXCL14O95715 111 aa19.11■□□□□ 0.65
TMEM260-203ENST00000539559 FAM157BP0CG42 384 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms