RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 CTSBP07858 339 aa16.08■□□□□ 0.16
PCDHB17P-201ENST00000539533 PPM1FP49593 454 aaPredicted RBP16.08■□□□□ 0.16
PCDHB17P-201ENST00000539533 DEFB110Q30KQ9 67 aa16.08■□□□□ 0.16
PCDHB17P-201ENST00000539533 ZNF750Q32MQ0 723 aa16.08■□□□□ 0.16
PCDHB17P-201ENST00000539533 LYSMD4Q5XG99 296 aa16.08■□□□□ 0.16
PCDHB17P-201ENST00000539533 ZNF764Q96H86 408 aaPredicted RBP16.08■□□□□ 0.16
PCDHB17P-201ENST00000539533 SLC35C2Q9NQQ7 365 aa16.08■□□□□ 0.16
PCDHB17P-201ENST00000539533 PRMT8Q9NR22 394 aaPredicted RBP16.08■□□□□ 0.16
PCDHB17P-201ENST00000539533 OSGIN1Q9UJX0 560 aa16.08■□□□□ 0.16
PCDHB17P-201ENST00000539533 CORO2BQ9UQ03 480 aa16.08■□□□□ 0.16
PCDHB17P-201ENST00000539533 WDFY4Q6ZS81 3184 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 SLC9B1P1A6NJY1 282 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 LAMTOR5O43504 91 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 MRPS14O60783 128 aaKnown RBP16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 CD40LGP29965 261 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 DNAJA1P31689 397 aaKnown RBP16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 PTGER1P34995 402 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 TGFBR1P36897 503 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 CAPZBP47756 277 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 PPP5CP53041 499 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 VSX2P58304 361 aaPredicted RBP16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 BNC1Q01954 994 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 C14orf28Q4W4Y0 310 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 FAM92BQ6ZTR7 304 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 MAML2Q8IZL2 1156 aaPredicted RBP16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 SHISA5Q8N114 240 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 SDR16C5Q8N3Y7 309 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 NATD1Q8N6N6 113 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 Q8N9G6 341 aaPredicted RBP16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 AVL9Q8NBF6 648 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 OR52N2Q8NGI0 321 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 RHOXF1Q8NHV9 184 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 EDAQ92838 391 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 DACH2Q96NX9 599 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 MAP3K3Q99759 626 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 UCK1Q9HA47 277 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 EHD3Q9NZN3 535 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 CES1P1Q9UKY3 287 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 IFT52Q9Y366 437 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 A0A1W2PS29 197 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 hCG_2039718K7EN88 272 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 GUCY1B2O75343 617 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 DIRAS1O95057 198 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 CD36P16671 472 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 FPR1P21462 350 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 UQCRC2P22695 453 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 EPHA2P29317 976 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 KRT20P35900 424 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 TGFBR2P37173 567 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 CSTF1Q05048 431 aaKnown RBP16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 FADDQ13158 208 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 SUZ12Q15022 739 aaKnown RBP16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 CARTPTQ16568 116 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 PMS2CLQ68D20 193 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 ERICH5Q6P6B1 374 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 PRSS41Q7RTY9 318 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 TSPYL5Q86VY4 417 aaPredicted RBP16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 WDR5BQ86VZ2 330 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 PSMA8Q8TAA3 256 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 ZHX1-C8orf76Q96EF9 292 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 ZBED6CLQ96FA7 236 aaPredicted RBP16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 GLIPR2Q9H4G4 154 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 EPS8L2Q9H6S3 715 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 SIRT3Q9NTG7 399 aaPredicted RBP16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 PDP1Q9P0J1 537 aaPredicted RBP16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 CABIN1Q9Y6J0 2220 aa16.07■□□□□ 0.16
PCDHB17P-201ENST00000539533 ZDBF2Q9HCK1 2354 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 FRYLO94915 3013 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 LILRA5A6NI73 299 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 EFCAB9A8MZ26 197 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 TNFRSF21O75509 655 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 LCKP06239 509 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 C8orf89P0DMQ9 161 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 MYF5P13349 255 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 CTSKP43235 329 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 OLR1P78380 273 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 DUSP2Q05923 314 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 TEAD4Q15561 434 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 NKAIN2Q5VXU1 208 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 ARMC8Q8IUR7 673 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 C19orf47Q8N9M1 422 aaKnown RBP16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 CAPSLQ8WWF8 208 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 TMEM131Q92545 1883 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 CNRIP1Q96F85 164 aaPredicted RBP16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 NLNQ9BYT8 704 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 ANKHQ9HCJ1 492 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 C1GALT1Q9NS00 363 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 RASSF1Q9NS23 344 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 URADA6NGE7 173 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 ZNF860A6NHJ4 632 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 CLDN24A6NM45 220 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 B4GALT2O60909 372 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 FABP3P05413 133 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 ALPPL2P10696 532 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 DDX5P17844 614 aaKnown RBP16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 KDELR2P33947 212 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 NKX2-5P52952 324 aaPredicted RBP16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 GFERP55789 205 aa16.06■□□□□ 0.16
PCDHB17P-201ENST00000539533 RPS26P62854 115 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms