RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 AICDAQ9GZX7 198 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 DDX31Q9H8H2 851 aaKnown RBP11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 SLC24A3Q9HC58 644 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 MIEF1Q9NQG6 463 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 PRDM7Q9NQW5 492 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 ASIC5Q9NY37 505 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 TRPC4Q9UBN4 977 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 PHF11Q9UIL8 331 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 MAPRE3Q9UPY8 281 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 DLGAP4Q9Y2H0 992 aa11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 ANK3Q12955 4377 aaKnown RBP11.59□□□□□ -0.55
CLSTN3-208ENST00000538933 HIVEP2P31629 2446 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 C4orf51C9J302 202 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 H0YIG0 161 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 FCHO1O14526 889 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 RDH16O75452 317 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 B3GALT4O96024 378 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 TPOP07202 933 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 HEXBP07686 556 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 ALDOCP09972 364 aaKnown RBP11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 FAM58BPP0C7Q3 252 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 SMIM10L1P0DMW3 83 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 CD46P15529 392 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 SDC1P18827 310 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 CPN2P22792 545 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 TPP2P29144 1249 aaPredicted RBP11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 RPL3P39023 403 aaKnown RBP11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 ATP4BP51164 291 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 DIO3P55073 304 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 TAS2R50P59544 299 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 TRA2BP62995 288 aaKnown RBP11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 OLR1P78380 273 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 RAE1P78406 368 aaKnown RBP11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 GABPB1Q06547 395 aaPredicted RBP11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 C2orf80Q0P641 193 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 HEPACAMQ14CZ8 416 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 KIAA0040Q15053 153 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 PDCD4Q53EL6 469 aaKnown RBP11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 EMC4Q5J8M3 183 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 PLAG1Q6DJT9 500 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 TMEM211Q6ICI0 200 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 ZNF793Q6ZN11 406 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 ZCCHC7Q8N3Z6 543 aaKnown RBP11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 C16orf78Q8WTQ4 265 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 NUDT8Q8WV74 236 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 GFM2Q969S9 779 aaKnown RBP11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 SMIM10Q96HG1 83 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 PRPF18Q99633 342 aaKnown RBP11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 UTP23Q9BRU9 249 aaKnown RBP11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 NPLQ9BXD5 320 aaPredicted RBP11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 RASSF1Q9NS23 344 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 SIRT5Q9NXA8 310 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 MS4A12Q9NXJ0 267 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 HCN3Q9P1Z3 774 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 LRFN1Q9P244 771 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 BAIAP2L1Q9UHR4 511 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 CAPN7Q9Y6W3 813 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 CUBNO60494 3623 aa11.58□□□□□ -0.56
CLSTN3-208ENST00000538933 A0A0A6YYD5 115 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 IGHV3-20A0A0C4DH32 117 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 A0A1B0GTH9 108 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 AKAP10O43572 662 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 SLC22A3O75751 556 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 LRATO95237 230 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 LY6G6DO95868 133 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 IL3P08700 152 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 COX7A2P14406 83 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 PTGS2P35354 604 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 CLNS1AP54105 237 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 PTGR1Q14914 329 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 MFSD4BQ5TF39 518 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 SLC25A25Q6KCM7 469 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 IKBIPQ70UQ0 350 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 PRSS41Q7RTY9 318 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 R3HCC1LQ7Z5L2 792 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 CAMKMTQ7Z624 323 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 GPR180Q86V85 440 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 CD163Q86VB7 1156 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 ZNF227Q86WZ6 799 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 CDC20BQ86Y33 519 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 ZC3H7AQ8IWR0 971 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 ARHGEF39Q8N4T4 335 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 CPSF7Q8N684 471 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 TMEM178AQ8NBL3 297 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 RND1Q92730 232 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 ERP27Q96DN0 273 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 RMND5BQ96G75 393 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 FCRL1Q96LA6 429 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 GPATCH1Q9BRR8 931 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 ZNF717Q9BY31 904 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 NMUR2Q9GZQ4 415 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 CLEC4MQ9H2X3 399 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 LYRM4Q9HD34 91 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 MYNNQ9NPC7 610 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 C14orf105Q9NVL8 296 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 ZIM2Q9NZV7 527 aa11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 MRPS33Q9Y291 106 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 WBP11Q9Y2W2 641 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-208ENST00000538933 NR5A2O00482 541 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 CHST10O43529 356 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms