RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 PRR5P85299 388 aa23.42■■□□□ 1.34
RAB40C-204ENST00000538492 TMEM201Q5SNT2 666 aa23.42■■□□□ 1.34
RAB40C-204ENST00000538492 ZNF425Q6IV72 752 aa23.42■■□□□ 1.34
RAB40C-204ENST00000538492 MORN4Q8NDC4 146 aa23.42■■□□□ 1.34
RAB40C-204ENST00000538492 NUP43Q8NFH3 380 aa23.42■■□□□ 1.34
RAB40C-204ENST00000538492 OR56A1Q8NGH5 318 aa23.42■■□□□ 1.34
RAB40C-204ENST00000538492 CCL4L1Q8NHW4 92 aa23.42■■□□□ 1.34
RAB40C-204ENST00000538492 OR2M4Q96R27 311 aa23.42■■□□□ 1.34
RAB40C-204ENST00000538492 C6orf106Q9H6K1 298 aaPredicted RBP23.42■■□□□ 1.34
RAB40C-204ENST00000538492 COLEC10Q9Y6Z7 277 aa23.42■■□□□ 1.34
RAB40C-204ENST00000538492 CEP290O15078 2479 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 TBX1O43435 398 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 KCNJ13O60928 360 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 CSTF2P33240 577 aaKnown RBP eCLIP23.41■■□□□ 1.34
RAB40C-204ENST00000538492 CD300CQ08708 224 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 GINS1Q14691 196 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 INAVAQ3KP66 663 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 ENPP7Q6UWV6 458 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 C11orf74Q86VG3 221 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 PRRC1Q96M27 445 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 NXF2Q9GZY0 626 aaKnown RBP23.41■■□□□ 1.34
RAB40C-204ENST00000538492 QPCTLQ9NXS2 382 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 CCDC59Q9P031 241 aaKnown RBP23.41■■□□□ 1.34
RAB40C-204ENST00000538492 SCN2AQ99250 2005 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 A0A0G2JPF8 293 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 HNRNPCL2B2RXH8 293 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 HNRNPCL3B7ZW38 293 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 CSO75390 466 aaKnown RBP23.41■■□□□ 1.34
RAB40C-204ENST00000538492 GPX5O75715 221 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 NTN1O95631 604 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 HNRNPCL4P0DMR1 293 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 S100A5P33763 92 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 CHRNEQ04844 493 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 MFSD4BQ5TF39 518 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 ACSM5Q6NUN0 579 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 C19orf48Q6RUI8 117 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 PAQR6Q6TCH4 344 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 VRK2Q86Y07 508 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 TAPBPLQ9BX59 468 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 KIR3DX1Q9H7L2 352 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 HHATLQ9HCP6 504 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 EXOSC4Q9NPD3 245 aaKnown RBP23.41■■□□□ 1.34
RAB40C-204ENST00000538492 CD93Q9NPY3 652 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 SNX7Q9UNH6 387 aa23.41■■□□□ 1.34
RAB40C-204ENST00000538492 RPL36Q9Y3U8 105 aaKnown RBP23.41■■□□□ 1.34
RAB40C-204ENST00000538492 EMC8O43402 210 aa23.4■■□□□ 1.34
RAB40C-204ENST00000538492 ADAM23O75077 832 aa23.4■■□□□ 1.34
RAB40C-204ENST00000538492 TNFRSF4P43489 277 aa23.4■■□□□ 1.34
RAB40C-204ENST00000538492 STXBP1P61764 594 aaKnown RBP23.4■■□□□ 1.34
RAB40C-204ENST00000538492 SLC13A2Q13183 592 aa23.4■■□□□ 1.34
RAB40C-204ENST00000538492 GNA13Q14344 377 aa23.4■■□□□ 1.34
RAB40C-204ENST00000538492 SHHQ15465 462 aa23.4■■□□□ 1.34
RAB40C-204ENST00000538492 ZNF311Q5JNZ3 666 aa23.4■■□□□ 1.34
RAB40C-204ENST00000538492 ANKRD54Q6NXT1 300 aa23.4■■□□□ 1.34
RAB40C-204ENST00000538492 SRFBP1Q8NEF9 429 aaKnown RBP23.4■■□□□ 1.34
RAB40C-204ENST00000538492 OR1E3Q8WZA6 343 aa23.4■■□□□ 1.34
RAB40C-204ENST00000538492 ELP4Q96EB1 424 aa23.4■■□□□ 1.34
RAB40C-204ENST00000538492 SARGQ9BW04 601 aa23.4■■□□□ 1.34
RAB40C-204ENST00000538492 GIMAP4Q9NUV9 329 aa23.4■■□□□ 1.34
RAB40C-204ENST00000538492 GPR55Q9Y2T6 319 aaPredicted RBP23.4■■□□□ 1.34
RAB40C-204ENST00000538492 LSM2Q9Y333 95 aaKnown RBP23.4■■□□□ 1.34
RAB40C-204ENST00000538492 TICRRQ7Z2Z1 1910 aa23.4■■□□□ 1.34
RAB40C-204ENST00000538492 UPK1BO75841 260 aa23.4■■□□□ 1.34
RAB40C-204ENST00000538492 SEPHS1P49903 392 aa23.4■■□□□ 1.34
RAB40C-204ENST00000538492 VN1R4Q7Z5H5 301 aa23.4■■□□□ 1.34
RAB40C-204ENST00000538492 ZNF780BQ9Y6R6 833 aa23.4■■□□□ 1.34
RAB40C-204ENST00000538492 ZNF888P0CJ79 500 aaPredicted RBP23.39■■□□□ 1.34
RAB40C-204ENST00000538492 HOXB2P14652 356 aa23.39■■□□□ 1.34
RAB40C-204ENST00000538492 GIPRP48546 466 aa23.39■■□□□ 1.34
RAB40C-204ENST00000538492 PCYT1AP49585 367 aa23.39■■□□□ 1.34
RAB40C-204ENST00000538492 SPHARQ15513 63 aa23.39■■□□□ 1.34
RAB40C-204ENST00000538492 TIMM50Q3ZCQ8 353 aa23.39■■□□□ 1.34
RAB40C-204ENST00000538492 TRIM73Q86UV7 250 aa23.39■■□□□ 1.34
RAB40C-204ENST00000538492 IL17RCQ8NAC3 791 aa23.39■■□□□ 1.34
RAB40C-204ENST00000538492 TSACCQ96A04 125 aaPredicted RBP23.39■■□□□ 1.34
RAB40C-204ENST00000538492 COL26A1Q96A83 441 aa23.39■■□□□ 1.34
RAB40C-204ENST00000538492 ZNF681Q96N22 645 aa23.39■■□□□ 1.34
RAB40C-204ENST00000538492 PINK1Q9BXM7 581 aa23.39■■□□□ 1.34
RAB40C-204ENST00000538492 PLA2G12AQ9BZM1 189 aa23.39■■□□□ 1.34
RAB40C-204ENST00000538492 SLC38A1Q9H2H9 487 aa23.39■■□□□ 1.34
RAB40C-204ENST00000538492 EGLN3Q9H6Z9 239 aa23.39■■□□□ 1.34
RAB40C-204ENST00000538492 A0A1W2PQF6 199 aa23.39■■□□□ 1.33
RAB40C-204ENST00000538492 SCG5P05408 212 aa23.39■■□□□ 1.33
RAB40C-204ENST00000538492 TAS2R41P59536 307 aa23.39■■□□□ 1.33
RAB40C-204ENST00000538492 HOXC5Q00444 222 aa23.39■■□□□ 1.33
RAB40C-204ENST00000538492 RHAGQ02094 409 aa23.39■■□□□ 1.33
RAB40C-204ENST00000538492 MEDAGQ5VYS4 303 aa23.39■■□□□ 1.33
RAB40C-204ENST00000538492 SDE2Q6IQ49 451 aa23.39■■□□□ 1.33
RAB40C-204ENST00000538492 MINDY2Q8NBR6 621 aa23.39■■□□□ 1.33
RAB40C-204ENST00000538492 CNPPD1Q9BV87 410 aa23.39■■□□□ 1.33
RAB40C-204ENST00000538492 HEBP2Q9Y5Z4 205 aa23.39■■□□□ 1.33
RAB40C-204ENST00000538492 A3GALT2U3KPV4 340 aa23.39■■□□□ 1.33
RAB40C-204ENST00000538492 CPSF4LA6NMK7 179 aaKnown RBP23.38■■□□□ 1.33
RAB40C-204ENST00000538492 ALDH6A1Q02252 535 aaKnown RBP23.38■■□□□ 1.33
RAB40C-204ENST00000538492 COX10Q12887 443 aa23.38■■□□□ 1.33
RAB40C-204ENST00000538492 NCF4Q15080 339 aa23.38■■□□□ 1.33
RAB40C-204ENST00000538492 C1orf94Q6P1W5 598 aa23.38■■□□□ 1.33
RAB40C-204ENST00000538492 MTSS1LQ765P7 747 aa23.38■■□□□ 1.33
RAB40C-204ENST00000538492 LSRQ86X29 649 aaPredicted RBP23.38■■□□□ 1.33
RAB40C-204ENST00000538492 LYSMD2Q8IV50 215 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms