RNA–Protein interactions for RNA: ENST00000530836.5

VPS28-212, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-212ENST00000530836 LIPT1Q9Y234 373 aa19.82■□□□□ 0.76
VPS28-212ENST00000530836 TMEM184BQ9Y519 407 aaPredicted RBP19.82■□□□□ 0.76
VPS28-212ENST00000530836 V9GYQ6 96 aa19.82■□□□□ 0.76
VPS28-212ENST00000530836 OR12D1P0DN82 309 aa19.81■□□□□ 0.76
VPS28-212ENST00000530836 FBLP22087 321 aaKnown RBP19.81■□□□□ 0.76
VPS28-212ENST00000530836 PEX2P28328 305 aa19.81■□□□□ 0.76
VPS28-212ENST00000530836 ETV5P41161 510 aa19.81■□□□□ 0.76
VPS28-212ENST00000530836 ID2Q02363 134 aa19.81■□□□□ 0.76
VPS28-212ENST00000530836 MAP4K2Q12851 820 aa19.81■□□□□ 0.76
VPS28-212ENST00000530836 IL11RAQ14626 422 aa19.81■□□□□ 0.76
VPS28-212ENST00000530836 IGF2-ASQ6U949 168 aa19.81■□□□□ 0.76
VPS28-212ENST00000530836 XAGE5Q8WWM1 108 aa19.81■□□□□ 0.76
VPS28-212ENST00000530836 RASSF5Q8WWW0 418 aa19.81■□□□□ 0.76
VPS28-212ENST00000530836 EME1Q96AY2 570 aa19.81■□□□□ 0.76
VPS28-212ENST00000530836 CTHRC1Q96CG8 243 aa19.81■□□□□ 0.76
VPS28-212ENST00000530836 SERHL2Q9H4I8 314 aa19.81■□□□□ 0.76
VPS28-212ENST00000530836 FBXO8Q9NRD0 319 aa19.81■□□□□ 0.76
VPS28-212ENST00000530836 DHCR7Q9UBM7 475 aaKnown RBP19.81■□□□□ 0.76
VPS28-212ENST00000530836 LRRC42Q9Y546 428 aa19.81■□□□□ 0.76
VPS28-212ENST00000530836 AK5Q9Y6K8 562 aa19.81■□□□□ 0.76
VPS28-212ENST00000530836 AKAP13Q12802 2813 aa19.81■□□□□ 0.76
VPS28-212ENST00000530836 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 TPST1O60507 370 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 DXOO77932 396 aaKnown RBP19.8■□□□□ 0.76
VPS28-212ENST00000530836 TNFSF15O95150 251 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 BCHEP06276 602 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 SELENOWP63302 87 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 GRAMD1BQ3KR37 738 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 CYBRD1Q53TN4 286 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 ATAD3BQ5T9A4 648 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 FHL5Q5TD97 284 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 LPCAT4Q643R3 524 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 METTL27Q8N6F8 245 aaPredicted RBP19.8■□□□□ 0.76
VPS28-212ENST00000530836 GATA6Q92908 595 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 GIMAP5Q96F15 307 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 DGAT2Q96PD7 388 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 ZNF607Q96SK3 696 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 DOHHQ9BU89 302 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 ALOXE3Q9BYJ1 711 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 EXD2Q9NVH0 621 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 SLC39A1Q9NY26 324 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 MAT2BQ9NZL9 334 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 CALML5Q9NZT1 146 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 MAU2Q9Y6X3 613 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 ADAMTS20P59510 1910 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 CLOCKO15516 846 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 COQ9O75208 318 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 GCM2O75603 506 aaPredicted RBP19.8■□□□□ 0.76
VPS28-212ENST00000530836 RBMS1P29558 406 aaKnown RBP19.8■□□□□ 0.76
VPS28-212ENST00000530836 MAGEA2P43356 314 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 STT3AP46977 705 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 CRISP3P54108 245 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 MRPS35P82673 323 aaKnown RBP19.8■□□□□ 0.76
VPS28-212ENST00000530836 SYT16Q17RD7 645 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 HMBOX1Q6NT76 420 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 MFSD12Q6NUT3 480 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 CDC73Q6P1J9 531 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 PPP1R3BQ86XI6 285 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 GALNT12Q8IXK2 581 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 FAM86B1Q8N7N1 296 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 ADAMTS15Q8TE58 950 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 RAB8BQ92930 207 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 TMEM19Q96HH6 336 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 TAAR9Q96RI9 348 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 ZNF184Q99676 751 aaPredicted RBP19.8■□□□□ 0.76
VPS28-212ENST00000530836 RBCK1Q9BYM8 510 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 IL1RAPQ9NPH3 570 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 MKKSQ9NPJ1 570 aaPredicted RBP19.8■□□□□ 0.76
VPS28-212ENST00000530836 DTNAQ9Y4J8 743 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 PCDHGB3Q9Y5G1 929 aa19.8■□□□□ 0.76
VPS28-212ENST00000530836 M0QX08 132 aa19.79■□□□□ 0.76
VPS28-212ENST00000530836 PGM3O95394 542 aa19.79■□□□□ 0.76
VPS28-212ENST00000530836 NR2F1P10589 423 aa19.79■□□□□ 0.76
VPS28-212ENST00000530836 AQP1P29972 269 aa19.79■□□□□ 0.76
VPS28-212ENST00000530836 OR1D4P47884 311 aa19.79■□□□□ 0.76
VPS28-212ENST00000530836 MAN2A2P49641 1150 aa19.79■□□□□ 0.76
VPS28-212ENST00000530836 ARHGAP40Q5TG30 622 aa19.79■□□□□ 0.76
VPS28-212ENST00000530836 QSOX2Q6ZRP7 698 aa19.79■□□□□ 0.76
VPS28-212ENST00000530836 AMIGO2Q86SJ2 522 aa19.79■□□□□ 0.76
VPS28-212ENST00000530836 KRT73Q86Y46 540 aa19.79■□□□□ 0.76
VPS28-212ENST00000530836 VWA5B2Q8N398 1253 aa19.79■□□□□ 0.76
VPS28-212ENST00000530836 BBS10Q8TAM1 723 aa19.79■□□□□ 0.76
VPS28-212ENST00000530836 DNAJC9Q8WXX5 260 aa19.79■□□□□ 0.76
VPS28-212ENST00000530836 HSH2DQ96JZ2 352 aa19.79■□□□□ 0.76
VPS28-212ENST00000530836 OR7D2Q96RA2 312 aa19.79■□□□□ 0.76
VPS28-212ENST00000530836 SPATA5L1Q9BVQ7 753 aa19.79■□□□□ 0.76
VPS28-212ENST00000530836 YIPF2Q9BWQ6 316 aa19.79■□□□□ 0.76
VPS28-212ENST00000530836 B3GNT4Q9C0J1 378 aa19.79■□□□□ 0.76
VPS28-212ENST00000530836 SEMA6AQ9H2E6 1030 aa19.79■□□□□ 0.76
VPS28-212ENST00000530836 BCL2L10Q9HD36 194 aa19.79■□□□□ 0.76
VPS28-212ENST00000530836 GIN1Q9NXP7 522 aa19.79■□□□□ 0.76
VPS28-212ENST00000530836 DNAJB9Q9UBS3 223 aa19.79■□□□□ 0.76
VPS28-212ENST00000530836 BAG5Q9UL15 447 aa19.79■□□□□ 0.76
VPS28-212ENST00000530836 C15orf41Q9Y2V0 281 aa19.79■□□□□ 0.76
VPS28-212ENST00000530836 H0YJX3 145 aa19.78■□□□□ 0.76
VPS28-212ENST00000530836 POLR1CO15160 346 aaPredicted RBP19.78■□□□□ 0.76
VPS28-212ENST00000530836 SLC28A2O43868 658 aa19.78■□□□□ 0.76
VPS28-212ENST00000530836 BRINP1O60477 761 aa19.78■□□□□ 0.76
VPS28-212ENST00000530836 SERPINB7O75635 380 aa19.78■□□□□ 0.76
VPS28-212ENST00000530836 FGF5P12034 268 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms