RNA–Protein interactions for RNA: ENST00000530680.1

SRPRA-204, Transcript of SRP receptor subunit alpha, humanhuman

TSL 4

Gene SRPRA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-204ENST00000530680 C16orf52Q8NHV5 167 aa13.76□□□□□ -0.21
SRPRA-204ENST00000530680 NUBPLQ8TB37 319 aa13.76□□□□□ -0.21
SRPRA-204ENST00000530680 ASB15Q8WXK1 588 aa13.76□□□□□ -0.21
SRPRA-204ENST00000530680 ELP4Q96EB1 424 aa13.76□□□□□ -0.21
SRPRA-204ENST00000530680 ITCHQ96J02 903 aa13.76□□□□□ -0.21
SRPRA-204ENST00000530680 WWTR1Q9GZV5 400 aa13.76□□□□□ -0.21
SRPRA-204ENST00000530680 TMEM45AQ9NWC5 275 aa13.76□□□□□ -0.21
SRPRA-204ENST00000530680 TUBD1Q9UJT1 453 aa13.76□□□□□ -0.21
SRPRA-204ENST00000530680 HEMK1Q9Y5R4 338 aaPredicted RBP13.76□□□□□ -0.21
SRPRA-204ENST00000530680 UBR5O95071 2799 aaPredicted RBP13.75□□□□□ -0.21
SRPRA-204ENST00000530680 RNF103-CHMP3A0A140T963 221 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 PLOD2O00469 737 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 RFXANKO14593 260 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 SHOX2O60902 331 aaPredicted RBP13.75□□□□□ -0.21
SRPRA-204ENST00000530680 ITGA10O75578 1167 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 CEACAM4O75871 244 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 CBX7O95931 251 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 IL12AP29459 219 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 KRT20P35900 424 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 PRIM2P49643 509 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 MFAP5Q13361 173 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 UBAP2LQ14157 1087 aaKnown RBP13.75□□□□□ -0.21
SRPRA-204ENST00000530680 RCAN2Q14206 197 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 EBPQ15125 230 aaKnown RBP13.75□□□□□ -0.21
SRPRA-204ENST00000530680 NNATQ16517 81 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 VPS26BQ4G0F5 336 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 GK5Q6ZS86 529 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 LGI4Q8N135 537 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 BEST3Q8N1M1 668 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 ZADH2Q8N4Q0 377 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 ANKS4BQ8N8V4 417 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 OR5AK3PQ8NH89 298 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 SFXN5Q8TD22 340 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 VPS33AQ96AX1 596 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 CTHRC1Q96CG8 243 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 ABHD17AQ96GS6 310 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 CCT8L2Q96SF2 557 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 UTP23Q9BRU9 249 aaKnown RBP13.75□□□□□ -0.21
SRPRA-204ENST00000530680 ITPAQ9BY32 194 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.75□□□□□ -0.21
SRPRA-204ENST00000530680 ANKRA2Q9H9E1 313 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 STMN3Q9NZ72 180 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 BTNL2Q9UIR0 455 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 ZNF223Q9UK11 482 aaPredicted RBP13.75□□□□□ -0.21
SRPRA-204ENST00000530680 FAF1Q9UNN5 650 aaPredicted RBP13.75□□□□□ -0.21
SRPRA-204ENST00000530680 C19orf53Q9UNZ5 99 aaPredicted RBP13.75□□□□□ -0.21
SRPRA-204ENST00000530680 ERVK-11Q9UQG0 969 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 ARL2BPQ9Y2Y0 163 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 OR10H1Q9Y4A9 318 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 PCDHGB7Q9Y5F8 929 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 NUP214P35658 2090 aaPredicted RBP13.75□□□□□ -0.21
SRPRA-204ENST00000530680 BOD1L1Q8NFC6 3051 aa13.75□□□□□ -0.21
SRPRA-204ENST00000530680 NDUFAB1O14561 156 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 DPM1O60762 260 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 ERN1O75460 977 aaKnown RBP13.74□□□□□ -0.21
SRPRA-204ENST00000530680 DCTN3O75935 186 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 OR2J2O76002 312 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 FAM107AO95990 144 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 KRT16P08779 473 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 IFI6P09912 130 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 CCT3P49368 545 aaKnown RBP13.74□□□□□ -0.21
SRPRA-204ENST00000530680 TMED10P49755 219 aaKnown RBP13.74□□□□□ -0.21
SRPRA-204ENST00000530680 NR0B1P51843 470 aaKnown RBP13.74□□□□□ -0.21
SRPRA-204ENST00000530680 MLF1P58340 268 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 DCAF7P61962 342 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 HBA1P69905 142 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 MGAT2Q10469 447 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 MMEL1Q495T6 779 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 BLOC1S3Q6QNY0 202 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 TMEM64Q6YI46 380 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 ZNF621Q6ZSS3 439 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 ASB18Q6ZVZ8 466 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 HPS6Q86YV9 775 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 OR2L13Q8N349 312 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 CPSF7Q8N684 471 aaKnown RBP13.74□□□□□ -0.21
SRPRA-204ENST00000530680 HORMAD2Q8N7B1 307 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 AMER2Q8N7J2 671 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 ZNF615Q8N8J6 731 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 FAM120BQ96EK7 910 aaKnown RBP13.74□□□□□ -0.21
SRPRA-204ENST00000530680 SLC35G5Q96KT7 338 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 CCDC115Q96NT0 180 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 NMUR2Q9GZQ4 415 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 ZNF552Q9H707 407 aaPredicted RBP13.74□□□□□ -0.21
SRPRA-204ENST00000530680 CXorf36Q9H7Y0 433 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 LIN28AQ9H9Z2 209 aaKnown RBP13.74□□□□□ -0.21
SRPRA-204ENST00000530680 FOLH1BQ9HBA9 442 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 ZNF71Q9NQZ8 489 aaPredicted RBP13.74□□□□□ -0.21
SRPRA-204ENST00000530680 MYOTQ9UBF9 498 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 ZNF639Q9UID6 485 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 TP53TG5Q9Y2B4 290 aa13.74□□□□□ -0.21
SRPRA-204ENST00000530680 YARS2Q9Y2Z4 477 aaKnown RBP13.74□□□□□ -0.21
SRPRA-204ENST00000530680 A8MVJ9 347 aa13.73□□□□□ -0.21
SRPRA-204ENST00000530680 CAPN14A8MX76 684 aa13.73□□□□□ -0.21
SRPRA-204ENST00000530680 UPK1AO00322 258 aa13.73□□□□□ -0.21
SRPRA-204ENST00000530680 SLC22A2O15244 555 aa13.73□□□□□ -0.21
SRPRA-204ENST00000530680 PRKNO60260 465 aaPredicted RBP13.73□□□□□ -0.21
SRPRA-204ENST00000530680 F10P00742 488 aa13.73□□□□□ -0.21
SRPRA-204ENST00000530680 CLPSP04118 112 aa13.73□□□□□ -0.21
SRPRA-204ENST00000530680 SNRPB2P08579 225 aaKnown RBP13.73□□□□□ -0.21
SRPRA-204ENST00000530680 UQCRC2P22695 453 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms