RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 HADHAP40939 763 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 CDKN2BP42772 138 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 PRLHRP49683 370 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 GEMP55040 296 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 UFM1P61960 85 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 EFNB1P98172 346 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 SLC18A2Q05940 514 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 ABRQ12979 859 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 TAF1AQ15573 450 aaPredicted RBP4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 KYNUQ16719 465 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 ASTE1Q2TB18 679 aaPredicted RBP4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 EIF2S3LQ2VIR3 472 aaKnown RBP4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 PRR30Q53SZ7 412 aaPredicted RBP4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 C1QTNF12Q5T7M4 302 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 LYPLAL1Q5VWZ2 237 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 LCN10Q6JVE6 187 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 SARM1Q6SZW1 724 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 MFSD7Q6UXD7 560 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 PRSS45Q7RTY3 260 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 CFAP206Q8IYR0 622 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 ZNF567Q8N184 647 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 ZBTB2Q8N680 514 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 RBMXL3Q8N7X1 1067 aaKnown RBP4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 SLC38A9Q8NBW4 561 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 CLEC1AQ8NC01 280 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 OR8K1Q8NGG5 319 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 OR1L3Q8NH93 324 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 MPLKIPQ8TAP9 179 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 HEXDCQ8WVB3 486 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 ASB5Q8WWX0 329 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 TM9SF4Q92544 642 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 N4BP2L2Q92802 583 aaPredicted RBP4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 ULK4Q96C45 1275 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 OXNAD1Q96HP4 312 aaPredicted RBP4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 RBM41Q96IZ5 413 aaKnown RBP4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 RMDN2Q96LZ7 410 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 FER1L6-AS2Q96M78 137 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 CCDC42Q96M95 316 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 QKIQ96PU8 341 aaKnown RBP eCLIP4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 FERMT1Q9BQL6 677 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 NUF2Q9BZD4 464 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 ASB8Q9H765 288 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 MVB12BQ9H7P6 319 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 VPS37BQ9H9H4 285 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 PCDHB16Q9NRJ7 776 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 SNTG1Q9NSN8 517 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 IFNKQ9P0W0 207 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 GIMAP2Q9UG22 337 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 CRLS1Q9UJA2 301 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 CLDN16Q9Y5I7 305 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 ARL5AQ9Y689 179 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 SEC16AO15027 2179 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 SHANK1Q9Y566 2161 aa4.8□□□□□ -1.64
AMBRA1-209ENST00000529963 CCDC168Q8NDH2 2452 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 TNRC6AQ8NDV7 1962 aaKnown RBP4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 OTOGQ6ZRI0 2925 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 HIVEP1P15822 2718 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 ZNF749O43361 778 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 AGTP01019 485 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 LDLRP01130 860 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 CAPN1P07384 714 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 RNF224P0DH78 156 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 PRDX3P30048 256 aaKnown RBP4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 CA5AP35218 305 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 CD151P48509 253 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 LMAN1P49257 510 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 RAPSNQ13702 412 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 PRPSAP1Q14558 356 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 TAZQ16635 292 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 ZNF260Q3ZCT1 412 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 ZRANB3Q5FWF4 1079 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 ZNF789Q5FWF6 425 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 TFDP3Q5H9I0 405 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 Q5PR19 223 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 FAM69BQ5VUD6 431 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 MLIPQ5VWP3 458 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 AMIGO1Q86WK6 493 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 CADM3Q8N126 398 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 ZADH2Q8N4Q0 377 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 OR4K2Q8NGD2 314 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 LRRC45Q96CN5 670 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 HAUS1Q96CS2 278 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 SNRNP40Q96DI7 357 aaKnown RBP4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 RADILQ96JH8 1075 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 PPP1R2P1Q96PQ5 205 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 COPS8Q99627 209 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 C19orf43Q9BQ61 176 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 FICDQ9BVA6 458 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 PITPNM3Q9BZ71 974 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 ILKAPQ9H0C8 392 aaPredicted RBP4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 GBA3Q9H227 469 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 TFB2MQ9H5Q4 396 aaKnown RBP4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 COG4Q9H9E3 785 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 CORO1CQ9ULV4 474 aaPredicted RBP4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 PCDHGB5Q9Y5G0 923 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 MAGED1Q9Y5V3 778 aaPredicted RBP4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 KCNE2Q9Y6J6 123 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 AP1M2Q9Y6Q5 423 aa4.79□□□□□ -1.64
AMBRA1-209ENST00000529963 CELSR2Q9HCU4 2923 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms