RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 MTRF1LQ9UGC7 380 aaKnown RBP10.54□□□□□ -0.72
SRPRA-203ENST00000528744 BCAP29Q9UHQ4 241 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 TIMM22Q9Y584 194 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 PCDHGB3Q9Y5G1 929 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 KIAA1549Q9HCM3 1950 aa10.54□□□□□ -0.72
SRPRA-203ENST00000528744 ANKRD17O75179 2603 aaKnown RBP10.54□□□□□ -0.72
SRPRA-203ENST00000528744 C1orf226A1L170 272 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 AHRRA9YTQ3 701 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 TP53I11O14683 189 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 ICOSLGO75144 302 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 PPM1BO75688 479 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 SNX4O95219 450 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 ATP1B1P05026 303 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 SNRPAP09012 282 aaKnown RBP10.53□□□□□ -0.72
SRPRA-203ENST00000528744 CNTFP26441 200 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 STARP49675 285 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 FOXA1P55317 472 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 FOXF2Q12947 444 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 MYBPHQ13203 477 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 TSNAXIP1Q2TAA8 658 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 ZNF628Q5EBL2 1059 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 CES4AQ5XG92 561 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 HLA-DQA1Q5Y7H0 255 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 NPSR1Q6W5P4 371 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 CLYBLQ8N0X4 340 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 VWA5B2Q8N398 1253 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 LIX1Q8N485 282 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 C9orf106Q8NAJ2 232 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 FAM83FQ8NEG4 500 aaPredicted RBP10.53□□□□□ -0.72
SRPRA-203ENST00000528744 C17orf47Q8NEP4 570 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 OR4N2Q8NGD1 307 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 MZB1Q8WU39 189 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 ZNF592Q92610 1267 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 KAT2AQ92830 837 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 OMA1Q96E52 524 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 C11orf24Q96F05 449 aaPredicted RBP10.53□□□□□ -0.72
SRPRA-203ENST00000528744 TMEM41AQ96HV5 264 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 ZNF597Q96LX8 424 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 SECISBP2Q96T21 854 aaKnown RBP10.53□□□□□ -0.72
SRPRA-203ENST00000528744 GPATCH1Q9BRR8 931 aaKnown RBP10.53□□□□□ -0.72
SRPRA-203ENST00000528744 G6PC3Q9BUM1 346 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 TXLNGYQ9BZA5 131 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 TNFRSF12AQ9NP84 129 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 TRPS1Q9UHF7 1281 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 TMCO1Q9UM00 188 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 NFU1Q9UMS0 254 aa10.53□□□□□ -0.72
SRPRA-203ENST00000528744 GPR55Q9Y2T6 319 aaPredicted RBP10.53□□□□□ -0.72
SRPRA-203ENST00000528744 C2CD3Q4AC94 2353 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 GOLGA8RI6L899 631 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 UBFD1O14562 309 aaKnown RBP10.52□□□□□ -0.73
SRPRA-203ENST00000528744 KRT38O76015 456 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 SUPT7LO94864 414 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 OTCP00480 354 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 IL3P08700 152 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 NUDT7P0C024 238 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 CT45A8P0DMV1 189 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 CT45A9P0DMV2 189 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 NAGAP17050 411 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 CSNK2A2P19784 350 aaPredicted RBP10.52□□□□□ -0.73
SRPRA-203ENST00000528744 DRD5P21918 477 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 BMP5P22003 454 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 TIMP3P35625 211 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 DEKP35659 375 aaKnown RBP10.52□□□□□ -0.73
SRPRA-203ENST00000528744 ALDH9A1P49189 494 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 SLC25A35Q3KQZ1 300 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 CT45A2Q5DJT8 189 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 NHSL2Q5HYW2 709 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 TBCELQ5QJ74 424 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 NSUN5P2Q63ZY6 315 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 ANGPTL8Q6UXH0 198 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 SH2D5Q6ZV89 423 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 PAGE2Q7Z2X7 111 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 NUP54Q7Z3B4 507 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 PACS2Q86VP3 889 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 TMEM200AQ86VY9 491 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 LRRN4CLQ8ND94 238 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 OR9A2Q8NGT5 310 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 LINC01560Q8TB33 94 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 RDH11Q8TC12 318 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 C16orf78Q8WTQ4 265 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 ABTB1Q969K4 478 aaPredicted RBP10.52□□□□□ -0.73
SRPRA-203ENST00000528744 TMBIM1Q969X1 311 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 KLHL29Q96CT2 875 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 LCORQ96JN0 433 aaPredicted RBP10.52□□□□□ -0.73
SRPRA-203ENST00000528744 ACPTQ9BZG2 426 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 C12orf65Q9H3J6 166 aaKnown RBP10.52□□□□□ -0.73
SRPRA-203ENST00000528744 BRF2Q9HAW0 419 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 SERHLQ9NQF3 203 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 CCM2LQ9NUG4 571 aaPredicted RBP10.52□□□□□ -0.73
SRPRA-203ENST00000528744 DNAJB12Q9NXW2 375 aaKnown RBP10.52□□□□□ -0.73
SRPRA-203ENST00000528744 VPS29Q9UBQ0 182 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 FBXL2Q9UKC9 423 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 EMCNQ9ULC0 261 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 EXO1Q9UQ84 846 aaKnown RBP10.52□□□□□ -0.73
SRPRA-203ENST00000528744 CAMK2AQ9UQM7 478 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 DLGAP4Q9Y2H0 992 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 MPDZO75970 2070 aa10.52□□□□□ -0.73
SRPRA-203ENST00000528744 SETD2Q9BYW2 2564 aaPredicted RBP10.52□□□□□ -0.73
SRPRA-203ENST00000528744 A0A087WUV0 522 aaPredicted RBP10.51□□□□□ -0.73
SRPRA-203ENST00000528744 A0A1W2PPM1 405 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms