RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 TUBA3EQ6PEY2 450 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 BHLHB9Q6PI77 547 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 VN1R4Q7Z5H5 301 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 LYSMD2Q8IV50 215 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 OR9A2Q8NGT5 310 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 ZG16BQ96DA0 208 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 ELP4Q96EB1 424 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 FCRL4Q96PJ5 515 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 PINK1Q9BXM7 581 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 SLC38A1Q9H2H9 487 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 TVP23BQ9NYZ1 205 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 KLF15Q9UIH9 416 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 CHST2Q9Y4C5 530 aa16.53■□□□□ 0.24
USH1C-205ENST00000527020 TBC1D3DA0A087WVF3 549 aa16.52■□□□□ 0.24
USH1C-205ENST00000527020 TBC1D3IA0A087WXS9 549 aa16.52■□□□□ 0.24
USH1C-205ENST00000527020 TBC1D3EA0A087X179 549 aa16.52■□□□□ 0.24
USH1C-205ENST00000527020 TBC1D3KA0A087X1G2 549 aa16.52■□□□□ 0.24
USH1C-205ENST00000527020 TBC1D3FA6NER0 549 aaPredicted RBP16.52■□□□□ 0.24
USH1C-205ENST00000527020 TBC1D3LB9A6J9 549 aa16.52■□□□□ 0.24
USH1C-205ENST00000527020 CASC3O15234 703 aaKnown RBP16.52■□□□□ 0.24
USH1C-205ENST00000527020 EMC8O43402 210 aa16.52■□□□□ 0.24
USH1C-205ENST00000527020 ASGR2P07307 311 aa16.52■□□□□ 0.24
USH1C-205ENST00000527020 ALOX5P09917 674 aa16.52■□□□□ 0.24
USH1C-205ENST00000527020 TBC1D3HP0C7X1 549 aa16.52■□□□□ 0.24
USH1C-205ENST00000527020 EFNB1P98172 346 aa16.52■□□□□ 0.24
USH1C-205ENST00000527020 CDK5Q00535 292 aa16.52■□□□□ 0.24
USH1C-205ENST00000527020 TBC1D3GQ6DHY5 549 aa16.52■□□□□ 0.24
USH1C-205ENST00000527020 TBC1D3CQ6IPX1 549 aa16.52■□□□□ 0.24
USH1C-205ENST00000527020 PAQR7Q86WK9 346 aa16.52■□□□□ 0.24
USH1C-205ENST00000527020 KIF18BQ86Y91 864 aa16.52■□□□□ 0.24
USH1C-205ENST00000527020 TBC1D3Q8IZP1 549 aaPredicted RBP16.52■□□□□ 0.24
USH1C-205ENST00000527020 CADM3Q8N126 398 aa16.52■□□□□ 0.24
USH1C-205ENST00000527020 FAM26EQ8N5C1 309 aa16.52■□□□□ 0.24
USH1C-205ENST00000527020 KCT2Q8NC54 265 aa16.52■□□□□ 0.24
USH1C-205ENST00000527020 OR4E2Q8NGC2 313 aa16.52■□□□□ 0.24
USH1C-205ENST00000527020 MOAP1Q96BY2 351 aa16.52■□□□□ 0.24
USH1C-205ENST00000527020 OR2M4Q96R27 311 aa16.52■□□□□ 0.24
USH1C-205ENST00000527020 GABRG3Q99928 467 aa16.52■□□□□ 0.24
USH1C-205ENST00000527020 POLDIP3Q9BY77 421 aaKnown RBP16.52■□□□□ 0.24
USH1C-205ENST00000527020 GPR55Q9Y2T6 319 aaPredicted RBP16.52■□□□□ 0.24
USH1C-205ENST00000527020 RPL36Q9Y3U8 105 aaKnown RBP16.52■□□□□ 0.24
USH1C-205ENST00000527020 F5P12259 2224 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 ISM1B1AKI9 464 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 ZIC2O95409 532 aaPredicted RBP16.51■□□□□ 0.23
USH1C-205ENST00000527020 DNTTP04053 509 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 HBQ1P09105 142 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 LAMP2P13473 410 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 NTSR1P30989 418 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 SOX3P41225 446 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 TSFMP43897 325 aaKnown RBP16.51■□□□□ 0.23
USH1C-205ENST00000527020 ANXA11P50995 505 aaKnown RBP16.51■□□□□ 0.23
USH1C-205ENST00000527020 CLDN2P57739 230 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 PRKCDQ05655 676 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 GINS1Q14691 196 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 LTB4RQ15722 352 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 ENTPD8Q5MY95 495 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 PRAMEF8Q5VWM4 474 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 PRAMEF7Q5VXH5 474 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 PAQR6Q6TCH4 344 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 MEX3DQ86XN8 651 aaKnown RBP16.51■□□□□ 0.23
USH1C-205ENST00000527020 SLC34A3Q8N130 599 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 IL17RCQ8NAC3 791 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 NUP43Q8NFH3 380 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 GIMAP5Q96F15 307 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 C1QTNF7Q9BXJ2 289 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 PLA2G12AQ9BZM1 189 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 C6orf106Q9H6K1 298 aaPredicted RBP16.51■□□□□ 0.23
USH1C-205ENST00000527020 EQTNQ9NQ60 294 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 ABCB10Q9NRK6 738 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 MKLN1Q9UL63 735 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 SNX7Q9UNH6 387 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 FANCMQ8IYD8 2048 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 SCN2AQ99250 2005 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 DNAH14Q0VDD8 3507 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 A0A1W2PQF6 199 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 BTN3A3O00478 584 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 TLX2O43763 284 aaPredicted RBP16.51■□□□□ 0.23
USH1C-205ENST00000527020 ENDOUP21128 410 aaKnown RBP16.51■□□□□ 0.23
USH1C-205ENST00000527020 AK4P27144 223 aaPredicted RBP16.51■□□□□ 0.23
USH1C-205ENST00000527020 GIPRP48546 466 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 PCYT1AP49585 367 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 CHRNEQ04844 493 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 GNA13Q14344 377 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 NDUFA9Q16795 377 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 TIMM50Q3ZCQ8 353 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 SYT14P1Q58G82 188 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 TJAP1Q5JTD0 557 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 SLC25A30Q5SVS4 291 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 AGAP7PQ5VUJ5 663 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 RNLSQ5VYX0 342 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 AMIGO1Q86WK6 493 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 VRK2Q86Y07 508 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 LINC00471Q8N535 108 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 NANOGP1Q8N7R0 232 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 SRFBP1Q8NEF9 429 aaKnown RBP16.51■□□□□ 0.23
USH1C-205ENST00000527020 FAM83FQ8NEG4 500 aaPredicted RBP16.51■□□□□ 0.23
USH1C-205ENST00000527020 OR1E3Q8WZA6 343 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 C10orf90Q96M02 699 aa16.51■□□□□ 0.23
USH1C-205ENST00000527020 TRNT1Q96Q11 434 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms