RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 MMABQ96EY8 250 aaPredicted RBP3.59□□□□□ -1.83
C11orf54-204ENST00000527003 ZBED6CLQ96FA7 236 aaPredicted RBP3.59□□□□□ -1.83
C11orf54-204ENST00000527003 VPS50Q96JG6 964 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 C10orf90Q96M02 699 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 ZNF578Q96N58 590 aaPredicted RBP3.59□□□□□ -1.83
C11orf54-204ENST00000527003 TSSK3Q96PN8 268 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 OR6C1Q96RD1 312 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 OR52E6Q96RD3 313 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 PELOQ9BRX2 385 aaKnown RBP3.59□□□□□ -1.83
C11orf54-204ENST00000527003 DUSP26Q9BV47 211 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 EBPLQ9BY08 206 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 SPRTNQ9H040 489 aaPredicted RBP3.59□□□□□ -1.83
C11orf54-204ENST00000527003 RAD21L1Q9H4I0 556 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 RPF2Q9H7B2 306 aaKnown RBP3.59□□□□□ -1.83
C11orf54-204ENST00000527003 WDR54Q9H977 334 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 ACTR5Q9H9F9 607 aaPredicted RBP3.59□□□□□ -1.83
C11orf54-204ENST00000527003 SMURF1Q9HCE7 757 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 ZNF304Q9HCX3 659 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 LHX9Q9NQ69 397 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 SLC35C2Q9NQQ7 365 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 C14orf105Q9NVL8 296 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 THUMPD1Q9NXG2 353 aaKnown RBP3.59□□□□□ -1.83
C11orf54-204ENST00000527003 SLC39A1Q9NY26 324 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 CCDC167Q9P0B6 97 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 KCMF1Q9P0J7 381 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 TMEM9Q9P0T7 183 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 SH3BP4Q9P0V3 963 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 ARMCX1Q9P291 453 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 ZNF282Q9UDV7 671 aaPredicted RBP3.59□□□□□ -1.83
C11orf54-204ENST00000527003 NDOR1Q9UHB4 597 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 BAIAP2L1Q9UHR4 511 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 BTNL2Q9UIR0 455 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 LEF1Q9UJU2 399 aaPredicted RBP3.59□□□□□ -1.83
C11orf54-204ENST00000527003 G3BP2Q9UN86 482 aaKnown RBP3.59□□□□□ -1.83
C11orf54-204ENST00000527003 CORO2BQ9UQ03 480 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 ENTPD4Q9Y227 616 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 NAALAD2Q9Y3Q0 740 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 LOXL2Q9Y4K0 774 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 MMACHCQ9Y4U1 282 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 PCDHGA8Q9Y5G5 932 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 PCDHGA7Q9Y5G6 932 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 GMEB1Q9Y692 573 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 ZNF780BQ9Y6R6 833 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 LRP4O75096 1905 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 CEP192Q8TEP8 1941 aa3.59□□□□□ -1.83
C11orf54-204ENST00000527003 GVINP1Q7Z2Y8 2422 aa3.59□□□□□ -1.84
C11orf54-204ENST00000527003 ZFC3H1O60293 1989 aaKnown RBP3.58□□□□□ -1.84
C11orf54-204ENST00000527003 KNTC1P50748 2209 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 IGLV3-12A0A075B6K2 115 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 A0A096LPI6 279 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 A0A0A6YYC8 382 aaPredicted RBP3.58□□□□□ -1.84
C11orf54-204ENST00000527003 LOC100653049A0A140TA62 436 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 A0A1W2PR48 441 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 A0A1W2PRB8 838 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 CFAP73A6NFT4 308 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 TTC36A6NLP5 189 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 GABRR3A8MPY1 467 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 EVPLLA8MZ36 301 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 C21orf140B9A014 251 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 C9J4A7 227 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 I3L1I5 382 aaPredicted RBP3.58□□□□□ -1.84
C11orf54-204ENST00000527003 ZNF561-AS1K7EIQ3 104 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 SGK494L7N484 410 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 RTCAO00442 366 aaKnown RBP3.58□□□□□ -1.84
C11orf54-204ENST00000527003 NR5A2O00482 541 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 RFXANKO14593 260 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 MRASO14807 208 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 NVLO15381 856 aaKnown RBP3.58□□□□□ -1.84
C11orf54-204ENST00000527003 GYG2O15488 501 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 CHST10O43529 356 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 AKAP10O43572 662 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 FOXS1O43638 330 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 TMPRSS11DO60235 418 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 SH3BGRLO75368 114 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 RDH16O75452 317 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 CYP7B1O75881 506 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 BCAS2O75934 225 aaPredicted RBP3.58□□□□□ -1.84
C11orf54-204ENST00000527003 KRT34O76011 436 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 LRATO95237 230 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 KCNK5O95279 499 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 KRT75O95678 551 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 GPR75O95800 540 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 AIFM1O95831 613 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 IGHEP01854 428 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 GBAP04062 536 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 FHP07954 510 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 IL3P08700 152 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 ZCCHC18P0CG32 403 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 SLC35E2P0CK97 266 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 PORP16435 677 aaPredicted RBP3.58□□□□□ -1.84
C11orf54-204ENST00000527003 HOXB6P17509 224 aaKnown RBP3.58□□□□□ -1.84
C11orf54-204ENST00000527003 IL1RNP18510 177 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 FBLP22087 321 aaKnown RBP3.58□□□□□ -1.84
C11orf54-204ENST00000527003 CERS1P27544 350 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 PTPN4P29074 926 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 RBMS1P29558 406 aaKnown RBP3.58□□□□□ -1.84
C11orf54-204ENST00000527003 RORAP35398 523 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 FRKP42685 505 aaPredicted RBP3.58□□□□□ -1.84
C11orf54-204ENST00000527003 ALDH9A1P49189 494 aa3.58□□□□□ -1.84
C11orf54-204ENST00000527003 ANXA11P50995 505 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms