RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 WIF1Q9Y5W5 379 aa5.77□□□□□ -1.49
VPS13B-211ENST00000522802 BZW2Q9Y6E2 419 aaKnown RBP5.77□□□□□ -1.49
VPS13B-211ENST00000522802 MED12Q93074 2177 aa5.77□□□□□ -1.49
VPS13B-211ENST00000522802 KCNE1BA0A087WTH5 132 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 C15orf38-AP3S2A0A0A6YYH1 394 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 C4orf51C9J302 202 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 E7ENX8 843 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 F8W8V4 182 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 APOC4-APOC2K7ER74 178 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 CES2O00748 559 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 PRMT5O14744 637 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-211ENST00000522802 NDUFS4O43181 175 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 CHST10O43529 356 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 SPOPO43791 374 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 CD5LO43866 347 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 NIPSNAP2O75323 286 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 PSIP1O75475 530 aaKnown RBP5.76□□□□□ -1.49
VPS13B-211ENST00000522802 LRATO95237 230 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 METTL18O95568 372 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 EPPINO95925 133 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 APOC2P02655 101 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 FAM157CP0CG43 387 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 CNR1P21554 472 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 CCKARP32238 428 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 TIMP3P35625 211 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 PIGAP37287 484 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 ADARP55265 1226 aaKnown RBP5.76□□□□□ -1.49
VPS13B-211ENST00000522802 TBPL1P62380 186 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 POU6F2P78424 691 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-211ENST00000522802 ABATP80404 500 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 TAP2Q03519 686 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 CRYZQ08257 329 aaKnown RBP5.76□□□□□ -1.49
VPS13B-211ENST00000522802 FOXF2Q12947 444 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 VEZF1Q14119 521 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 HABP2Q14520 560 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-211ENST00000522802 SLC10A1Q14973 349 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 ARHGAP19Q14CB8 494 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 SIX1Q15475 284 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-211ENST00000522802 CHRFAM7AQ494W8 412 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 ANKRD20A4Q4UJ75 823 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 KHDC1LQ5JSQ8 128 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 DCST1Q5T197 706 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 PLXDC2Q6UX71 529 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 RTL4Q6ZR62 310 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 RBM43Q6ZSC3 357 aaKnown RBP5.76□□□□□ -1.49
VPS13B-211ENST00000522802 ASPGQ86U10 573 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 CDKL3Q8IVW4 592 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-211ENST00000522802 GPALPP1Q8IXQ4 340 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 C9orf106Q8NAJ2 232 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 CPEB3Q8NE35 698 aaKnown RBP5.76□□□□□ -1.49
VPS13B-211ENST00000522802 OR52K1Q8NGK4 314 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 OR4L1Q8NH43 312 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 NEIL3Q8TAT5 605 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 ACTL9Q8TC94 416 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 MAGEC3Q8TD91 643 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 ZNF483Q8TF39 744 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-211ENST00000522802 PIK3IP1Q96FE7 263 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 VMP1Q96GC9 406 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 FOPNLQ96NB1 174 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 NAP1L5Q96NT1 182 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-211ENST00000522802 ALS2CR12Q96Q35 445 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 UTP6Q9NYH9 597 aaKnown RBP5.76□□□□□ -1.49
VPS13B-211ENST00000522802 GALPQ9UBC7 116 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 CLDN16Q9Y5I7 305 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 SLC22A7Q9Y694 548 aa5.76□□□□□ -1.49
VPS13B-211ENST00000522802 CENPVL1A0A0U1RR11 272 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 CTAGE15A4D2H0 777 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 MBD3L3A6NE82 208 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-211ENST00000522802 CTIFO43310 598 aaKnown RBP5.75□□□□□ -1.49
VPS13B-211ENST00000522802 PSTPIP1O43586 416 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 SPRY1O43609 319 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-211ENST00000522802 TLX2O43763 284 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-211ENST00000522802 LCMT2O60294 686 aaKnown RBP5.75□□□□□ -1.49
VPS13B-211ENST00000522802 CEP104O60308 925 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 SYF2O95926 243 aaKnown RBP5.75□□□□□ -1.49
VPS13B-211ENST00000522802 SLC35G6P0C7Q6 338 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 IL10P22301 178 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 CTNNA2P26232 953 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 LOXP28300 417 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-211ENST00000522802 IMPA1P29218 277 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 ATP5DP30049 168 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 CPOXP36551 454 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 CPA2P48052 419 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 GPR143P51810 404 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 EIF3BP55884 814 aaKnown RBP5.75□□□□□ -1.49
VPS13B-211ENST00000522802 EIF3EP60228 445 aaKnown RBP5.75□□□□□ -1.49
VPS13B-211ENST00000522802 ACVR1Q04771 509 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 GALEQ14376 348 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 HERC3Q15034 1050 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 STX1AQ16623 288 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 TIGD2Q4W5G0 525 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 FASTKD1Q53R41 847 aaKnown RBP5.75□□□□□ -1.49
VPS13B-211ENST00000522802 ACSBG2Q5FVE4 666 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 TSTD2Q5T7W7 516 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 PRAMEF20Q5VT98 475 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 NSUN5P2Q63ZY6 315 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 CAPN13Q6MZZ7 669 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-211ENST00000522802 CTAGE6Q86UF2 777 aa5.75□□□□□ -1.49
VPS13B-211ENST00000522802 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.75□□□□□ -1.492e-7■■■■■ 102.3
VPS13B-211ENST00000522802 KATNAL2Q8IYT4 538 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms