RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 ALKBH4Q9NXW9 302 aa10.56□□□□□ -0.72
VCAN-212ENST00000515397 SUCOQ9UBS9 1254 aaKnown RBP10.56□□□□□ -0.72
VCAN-212ENST00000515397 ZDHHC2Q9UIJ5 367 aa10.56□□□□□ -0.72
VCAN-212ENST00000515397 RAB21Q9UL25 225 aa10.56□□□□□ -0.72
VCAN-212ENST00000515397 ENTPD4Q9Y227 616 aa10.56□□□□□ -0.72
VCAN-212ENST00000515397 MEMO1Q9Y316 297 aa10.56□□□□□ -0.72
VCAN-212ENST00000515397 DNAJC15Q9Y5T4 150 aa10.56□□□□□ -0.72
VCAN-212ENST00000515397 ITPR2Q14571 2701 aa10.56□□□□□ -0.72
VCAN-212ENST00000515397 MED12Q93074 2177 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 LRRC3CA6NJW4 275 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 PRSS44E7EML9 344 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 ACOT7O00154 380 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 SLC28A1O00337 649 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 PRRG2O14669 202 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 PIP5K1BO14986 540 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 CTIFO43310 598 aaKnown RBP10.55□□□□□ -0.72
VCAN-212ENST00000515397 ITM2AO43736 263 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 RSL1D1O76021 490 aaKnown RBP10.55□□□□□ -0.72
VCAN-212ENST00000515397 BPGMP07738 259 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 NCBP2P52298 156 aaKnown RBP eCLIP10.55□□□□□ -0.72
VCAN-212ENST00000515397 CORO7P57737 925 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 MPP2Q14168 576 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 SLC10A1Q14973 349 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.55□□□□□ -0.721e-7■■□□□ 13.4
VCAN-212ENST00000515397 UGT3A2Q3SY77 523 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 GXYLT1Q4G148 440 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 EMC4Q5J8M3 183 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 KANK2Q63ZY3 851 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 ZNF585AQ6P3V2 769 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 NUDCD3Q8IVD9 361 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 FBXW8Q8N3Y1 598 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 OR4N2Q8NGD1 307 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 FAM57AQ8TBR7 257 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 SPPL2AQ8TCT8 520 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 TWIST2Q8WVJ9 160 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 TMBIM1Q969X1 311 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 CIDECQ96AQ7 238 aaPredicted RBP10.55□□□□□ -0.72
VCAN-212ENST00000515397 OMA1Q96E52 524 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 LCORQ96JN0 433 aaPredicted RBP10.55□□□□□ -0.72
VCAN-212ENST00000515397 PPP1R36Q96LQ0 422 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 C3orf30Q96M34 536 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 GNRHR2Q96P88 292 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 ZIM3Q96PE6 472 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 NODALQ96S42 347 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 DOHHQ9BU89 302 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 TMEM109Q9BVC6 243 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 SLC6A15Q9H2J7 730 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 GLIPR2Q9H4G4 154 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 EXO5Q9H790 373 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 ZDHHC11Q9H8X9 412 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 ZFP64Q9NPA5 681 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 MIEF1Q9NQG6 463 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 PNPLA3Q9NST1 481 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 GIMAP4Q9NUV9 329 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 SIRT5Q9NXA8 310 aa10.55□□□□□ -0.72
VCAN-212ENST00000515397 CELSR2Q9HCU4 2923 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 CRYBG3Q68DQ2 2970 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 C17orf51A8MQB3 221 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 MYO1GB0I1T2 1018 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 TP53I11O14683 189 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 GNB5O14775 395 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 RGS14O43566 566 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 NPHS1O60500 1241 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 PEX11AO75192 247 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 UGT2B11O75310 529 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 SKAP2O75563 359 aaPredicted RBP10.54□□□□□ -0.72
VCAN-212ENST00000515397 REM1O75628 298 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 MPIP34949 423 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 MC3RP41968 323 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 CASP3P42574 277 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 ETV4P43268 484 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 NRG3P56975 720 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 NAA20P61599 178 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 RPL38P63173 70 aaKnown RBP10.54□□□□□ -0.72
VCAN-212ENST00000515397 PLCXD2Q0VAA5 305 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 RPS6KA2Q15349 733 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 ZNF385BQ569K4 471 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 TMEM198Q66K66 360 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 ARHGAP11AQ6P4F7 1023 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 TMEM107Q6UX40 140 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 NPSR1Q6W5P4 371 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 TRILQ7L0X0 811 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 ZNF551Q7Z340 670 aaPredicted RBP10.54□□□□□ -0.72
VCAN-212ENST00000515397 FAM9CQ8IZT9 166 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 CLYBLQ8N0X4 340 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 FAM109AQ8N4B1 249 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 MARVELD2Q8N4S9 558 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 RILPQ96NA2 401 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 PAIP2Q9BPZ3 127 aaKnown RBP10.54□□□□□ -0.72
VCAN-212ENST00000515397 TRMOQ9BU70 441 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 GALNT9Q9HCQ5 603 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 KCNK9Q9NPC2 374 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 MYNNQ9NPC7 610 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 C1orf109Q9NX04 203 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 CNIH4Q9P003 139 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 SENP1Q9P0U3 644 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 TEX15Q9BXT5 2789 aa10.54□□□□□ -0.72
VCAN-212ENST00000515397 PKDREJQ9NTG1 2253 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 TRGV5A0A0B4J1U4 118 aa10.53□□□□□ -0.72
VCAN-212ENST00000515397 CAPN14A8MX76 684 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms