RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 SH2D2AQ9NP31 389 aa12.87□□□□□ -0.35
DDX41-212ENST00000511040 TUBA8Q9NY65 449 aaPredicted RBP12.87□□□□□ -0.35
DDX41-212ENST00000511040 PRODH2Q9UF12 536 aa12.87□□□□□ -0.35
DDX41-212ENST00000511040 SH3BGRL2Q9UJC5 107 aa12.87□□□□□ -0.35
DDX41-212ENST00000511040 ERRFI1Q9UJM3 462 aaPredicted RBP12.87□□□□□ -0.35
DDX41-212ENST00000511040 CFL2Q9Y281 166 aa12.87□□□□□ -0.35
DDX41-212ENST00000511040 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.87□□□□□ -0.35
DDX41-212ENST00000511040 NPFFR2Q9Y5X5 522 aa12.87□□□□□ -0.35
DDX41-212ENST00000511040 PDPK1O15530 556 aa12.86□□□□□ -0.35
DDX41-212ENST00000511040 ASNA1O43681 348 aa12.86□□□□□ -0.35
DDX41-212ENST00000511040 CDC40O60508 579 aaKnown RBP eCLIP12.86□□□□□ -0.35
DDX41-212ENST00000511040 PDE9AO76083 593 aa12.86□□□□□ -0.35
DDX41-212ENST00000511040 ABCD3P28288 659 aa12.86□□□□□ -0.35
DDX41-212ENST00000511040 MAPK1P28482 360 aa12.86□□□□□ -0.35
DDX41-212ENST00000511040 NRG3P56975 720 aa12.86□□□□□ -0.35
DDX41-212ENST00000511040 CORO7P57737 925 aa12.86□□□□□ -0.35
DDX41-212ENST00000511040 HSPB3Q12988 150 aa12.86□□□□□ -0.35
DDX41-212ENST00000511040 PTGR1Q14914 329 aa12.86□□□□□ -0.35
DDX41-212ENST00000511040 NTRK2Q16620 822 aa12.86□□□□□ -0.35
DDX41-212ENST00000511040 TTMPQ5BVD1 217 aa12.86□□□□□ -0.35
DDX41-212ENST00000511040 BICRALQ6AI39 1079 aa12.86□□□□□ -0.35
DDX41-212ENST00000511040 DESI1Q6ICB0 168 aa12.86□□□□□ -0.35
DDX41-212ENST00000511040 HDXQ7Z353 690 aa12.86□□□□□ -0.35
DDX41-212ENST00000511040 HOMEZQ8IX15 550 aa12.86□□□□□ -0.35
DDX41-212ENST00000511040 OR7A2PQ8NGA2 310 aa12.86□□□□□ -0.35
DDX41-212ENST00000511040 OR52N2Q8NGI0 321 aa12.86□□□□□ -0.35
DDX41-212ENST00000511040 PAQR8Q8TEZ7 354 aa12.86□□□□□ -0.35
DDX41-212ENST00000511040 LCORQ96JN0 433 aaPredicted RBP12.86□□□□□ -0.35
DDX41-212ENST00000511040 FAM173AQ9BQD7 235 aa12.86□□□□□ -0.35
DDX41-212ENST00000511040 NUF2Q9BZD4 464 aa12.86□□□□□ -0.35
DDX41-212ENST00000511040 DEFB127Q9H1M4 99 aa12.86□□□□□ -0.35
DDX41-212ENST00000511040 FOLH1BQ9HBA9 442 aa12.86□□□□□ -0.35
DDX41-212ENST00000511040 ARGLU1Q9NWB6 273 aaPredicted RBP12.86□□□□□ -0.35
DDX41-212ENST00000511040 CNOT11Q9UKZ1 510 aaKnown RBP12.86□□□□□ -0.35
DDX41-212ENST00000511040 CHCHD2Q9Y6H1 151 aaPredicted RBP12.86□□□□□ -0.35
DDX41-212ENST00000511040 TRGV8A0A0C4DH27 118 aa12.85□□□□□ -0.35
DDX41-212ENST00000511040 CAPN14A8MX76 684 aa12.85□□□□□ -0.35
DDX41-212ENST00000511040 LRRTM2O43300 516 aa12.85□□□□□ -0.35
DDX41-212ENST00000511040 PLOD3O60568 738 aa12.85□□□□□ -0.35
DDX41-212ENST00000511040 BCAS2O75934 225 aaPredicted RBP12.85□□□□□ -0.35
DDX41-212ENST00000511040 DRD5P21918 477 aa12.85□□□□□ -0.35
DDX41-212ENST00000511040 HPCAL1P37235 193 aa12.85□□□□□ -0.35
DDX41-212ENST00000511040 PPICP45877 212 aa12.85□□□□□ -0.35
DDX41-212ENST00000511040 ASMTP46597 345 aa12.85□□□□□ -0.35
DDX41-212ENST00000511040 SLC18A1P54219 525 aa12.85□□□□□ -0.35
DDX41-212ENST00000511040 KCNJ2P63252 427 aa12.85□□□□□ -0.35
DDX41-212ENST00000511040 PLCXD2Q0VAA5 305 aa12.85□□□□□ -0.35
DDX41-212ENST00000511040 ZNF155Q12901 538 aaPredicted RBP12.85□□□□□ -0.35
DDX41-212ENST00000511040 PDE7AQ13946 482 aa12.85□□□□□ -0.35
DDX41-212ENST00000511040 KRTCAP3Q53RY4 240 aa12.85□□□□□ -0.35
DDX41-212ENST00000511040 CMPK2Q5EBM0 449 aa12.85□□□□□ -0.35
DDX41-212ENST00000511040 NPSR1Q6W5P4 371 aa12.85□□□□□ -0.35
DDX41-212ENST00000511040 GK5Q6ZS86 529 aa12.85□□□□□ -0.35
DDX41-212ENST00000511040 WDR53Q7Z5U6 358 aaPredicted RBP12.85□□□□□ -0.35
DDX41-212ENST00000511040 DND1Q8IYX4 353 aaKnown RBP12.85□□□□□ -0.35
DDX41-212ENST00000511040 FBXW8Q8N3Y1 598 aa12.85□□□□□ -0.35
DDX41-212ENST00000511040 KRTCAP2Q8N6L1 136 aa12.85□□□□□ -0.35
DDX41-212ENST00000511040 C17orf47Q8NEP4 570 aa12.85□□□□□ -0.35
DDX41-212ENST00000511040 DIO2Q92813 273 aa12.85□□□□□ -0.35
DDX41-212ENST00000511040 ERP27Q96DN0 273 aa12.85□□□□□ -0.35
DDX41-212ENST00000511040 OMA1Q96E52 524 aa12.85□□□□□ -0.35
DDX41-212ENST00000511040 JSRP1Q96MG2 331 aaPredicted RBP12.85□□□□□ -0.35
DDX41-212ENST00000511040 TTTY12Q9BZ98 90 aa12.85□□□□□ -0.35
DDX41-212ENST00000511040 AKTIPQ9H8T0 292 aa12.85□□□□□ -0.35
DDX41-212ENST00000511040 PROK2Q9HC23 129 aa12.85□□□□□ -0.35
DDX41-212ENST00000511040 MARCOQ9UEW3 520 aaPredicted RBP12.85□□□□□ -0.35
DDX41-212ENST00000511040 SLC5A6Q9Y289 635 aa12.85□□□□□ -0.35
DDX41-212ENST00000511040 GPR55Q9Y2T6 319 aaPredicted RBP12.85□□□□□ -0.35
DDX41-212ENST00000511040 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.85□□□□□ -0.35
DDX41-212ENST00000511040 FLNCQ14315 2725 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 FRG2CA6NGY1 282 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 UPK1AO00322 258 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 TP53I11O14683 189 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 SCAMP2O15127 329 aaKnown RBP12.84□□□□□ -0.35
DDX41-212ENST00000511040 ERN1O75460 977 aaKnown RBP12.84□□□□□ -0.35
DDX41-212ENST00000511040 GLSO94925 669 aaPredicted RBP12.84□□□□□ -0.35
DDX41-212ENST00000511040 ABCB1P08183 1280 aaPredicted RBP12.84□□□□□ -0.35
DDX41-212ENST00000511040 STSP08842 583 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 KITP10721 976 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 G6PDP11413 515 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 GPC1P35052 558 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 CDK9P50750 372 aaKnown RBP12.84□□□□□ -0.35
DDX41-212ENST00000511040 RBPJQ06330 500 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 FOXO1Q12778 655 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 RPS6KA2Q15349 733 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 C4orf17Q53FE4 359 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 FGD2Q7Z6J4 655 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 FJX1Q86VR8 437 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 SLC44A2Q8IWA5 706 aaPredicted RBP12.84□□□□□ -0.35
DDX41-212ENST00000511040 GHDCQ8N2G8 530 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 TMEM251Q8N6I4 163 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 OR4N2Q8NGD1 307 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 SPPL2AQ8TCT8 520 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 TMBIM1Q969X1 311 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 ELP4Q96EB1 424 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 HSPBAP1Q96EW2 488 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 ATP6V1G3Q96LB4 118 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 VSTM2LQ96N03 204 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 BTBD9Q96Q07 612 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 IL1RL2Q9HB29 575 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms