RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 ZNF791Q3KP31 576 aaPredicted RBP6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 ELOA3BQ3SY89 546 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 TRMT12Q53H54 448 aaKnown RBP6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 EXOSC6Q5RKV6 272 aaKnown RBP6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 AGBL2Q5U5Z8 902 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 ACSM2BQ68CK6 577 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 BICRALQ6AI39 1079 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 ZNF605Q86T29 641 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 RPS19BP1Q86WX3 136 aaKnown RBP6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 TICAM1Q8IUC6 712 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 SULF2Q8IWU5 870 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 RIMKLAQ8IXN7 391 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 SLC5A8Q8N695 610 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 KRTCAP2Q8N6L1 136 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 ELOA3Q8NG57 546 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 C16orf52Q8NHV5 167 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 CDC26Q8NHZ8 85 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 KAT2AQ92830 837 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 TANKQ92844 425 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 GFM2Q969S9 779 aaKnown RBP6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 SENP5Q96HI0 755 aaPredicted RBP6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 PPP1R36Q96LQ0 422 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 TSSK3Q96PN8 268 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 CCT7Q99832 543 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 CNPPD1Q9BV87 410 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 IQCGQ9H095 443 aaKnown RBP6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 ILKAPQ9H0C8 392 aaPredicted RBP6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 NXF5Q9H1B4 397 aaKnown RBP6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 EPS8L2Q9H6S3 715 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 KLHL1Q9NR64 748 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 SIRT3Q9NTG7 399 aaPredicted RBP6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 C1orf109Q9NX04 203 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 MS4A12Q9NXJ0 267 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 MYOTQ9UBF9 498 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 BAIAP2L1Q9UHR4 511 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 CNOT11Q9UKZ1 510 aaKnown RBP6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 LIPGQ9Y5X9 500 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 USP9YO00507 2555 aaPredicted RBP6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 EML6Q6ZMW3 1958 aa6.65□□□□□ -1.34
TOPBP1-207ENST00000509162 SETXQ7Z333 2677 aaKnown RBP6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 EIF4E1BA6NMX2 242 aaKnown RBP6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 ADARB2-AS1A8MUL3 147 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 TMEM114B3SHH9 223 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 C9JVG2 144 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 CLDN4O14493 209 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 AKAP10O43572 662 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 PEX11AO75192 247 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 ERLIN1O75477 346 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 SMNDC1O75940 238 aaKnown RBP eCLIP6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 WISP1O95388 367 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 GHRHP01286 108 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 ANXA4P09525 319 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 NEFHP12036 1026 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 NT5EP21589 574 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 GALNSP34059 522 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 SERPINB5P36952 375 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 PTGDSP41222 190 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 MC3RP41968 323 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 FRKP42685 505 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 SLC1A6P48664 564 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 ALDH9A1P49189 494 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 EMDP50402 254 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 HLCSP50747 726 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 CLCN2P51788 898 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 XKP51811 444 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 SLC18A1P54219 525 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 DIO3P55073 304 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 WNT3P56703 355 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 CORO7P57737 925 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 GPR85P60893 370 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 FOXO1Q12778 655 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 ASPHQ12797 758 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 ZNF267Q14586 743 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 GALNTL6Q49A17 601 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 ZNF766Q5HY98 468 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 SPDYAQ5MJ70 313 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 C6orf136Q5SQH8 315 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 ABHD17BQ5VST6 288 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 RPUSD3Q6P087 351 aaKnown RBP6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 NCCRP1Q6ZVX7 275 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 PAGE2Q7Z2X7 111 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 ZNF551Q7Z340 670 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 GALNTL5Q7Z4T8 443 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 WDR53Q7Z5U6 358 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 SYT9Q86SS6 491 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 HPS6Q86YV9 775 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 NUDCD3Q8IVD9 361 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 DDIASQ8IXT1 998 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 PRR22Q8IZ63 422 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 CLYBLQ8N0X4 340 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 CNPY4Q8N129 248 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 TMEM132CQ8N3T6 1108 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 ZADH2Q8N4Q0 377 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 CPSF7Q8N684 471 aaKnown RBP6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 OR10G3Q8NGC4 313 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 OR4K14Q8NGD5 310 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 OR52R1Q8NGF1 315 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 NUBPLQ8TB37 319 aa6.64□□□□□ -1.35
TOPBP1-207ENST00000509162 ZNF675Q8TD23 568 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms