RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 TFEBP19484 476 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 HRH2P25021 359 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 ITGA3P26006 1051 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 CRABP2P29373 138 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 STX2P32856 288 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 XCR1P46094 333 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 MTNR1BP49286 362 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 BTN3A2P78410 334 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 BTG2P78543 158 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 ACTN3Q08043 901 aaPredicted RBP4.25□□□□□ -1.73
NUP54-206ENST00000508465 KLRB1Q12918 225 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 FAM53BQ14153 422 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 DOC2AQ14183 400 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 NAA25Q14CX7 972 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 PCBP2Q15366 365 aaKnown RBP eCLIP4.25□□□□□ -1.732e-6■■■■■ 27.6
NUP54-206ENST00000508465 TGFBIQ15582 683 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 NDUFA9Q16795 377 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 GRAMD1BQ3KR37 738 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 DEFB134Q4QY38 66 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 XKR6Q5GH73 641 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 TOR1AIP1Q5JTV8 583 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 FAM219BQ5XKK7 198 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 ADNP2Q6IQ32 1131 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 JMJD6Q6NYC1 403 aaPredicted RBP4.25□□□□□ -1.73
NUP54-206ENST00000508465 ANKRD16Q6P6B7 361 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 LCTLQ6UWM7 567 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 LANCL3Q6ZV70 420 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 TMPRSS11BQ86T26 416 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 RNF175Q8N4F7 328 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 SIRT6Q8N6T7 355 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 RBMXL3Q8N7X1 1067 aaKnown RBP4.25□□□□□ -1.73
NUP54-206ENST00000508465 CLEC1AQ8NC01 280 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 CAMKVQ8NCB2 501 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 CATSPER1Q8NEC5 780 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 PRSS3P2Q8NHM4 247 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 POC1BQ8TC44 478 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 UTP15Q8TED0 518 aaKnown RBP4.25□□□□□ -1.73
NUP54-206ENST00000508465 CREB3L4Q8TEY5 395 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 CCT6BQ92526 530 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 ANKRD7Q92527 254 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 KIAA1191Q96A73 305 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 MTFMTQ96DP5 389 aaKnown RBP4.25□□□□□ -1.73
NUP54-206ENST00000508465 THOC3Q96J01 351 aaKnown RBP4.25□□□□□ -1.73
NUP54-206ENST00000508465 UBXN10Q96LJ8 280 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 FER1L6-AS2Q96M78 137 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 F2RL3Q96RI0 385 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 SCN2AQ99250 2005 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 SARGQ9BW04 601 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 VN1R1Q9GZP7 353 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 SLC26A1Q9H2B4 701 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 PPCSQ9HAB8 311 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 NMRAL1Q9HBL8 299 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 POPDC3Q9HBV1 291 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 ANKHQ9HCJ1 492 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 MLXIPLQ9NP71 852 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 MKKSQ9NPJ1 570 aaPredicted RBP4.25□□□□□ -1.73
NUP54-206ENST00000508465 SNX15Q9NRS6 342 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 ANKMY1Q9P2S6 941 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 MTRF1LQ9UGC7 380 aaKnown RBP4.25□□□□□ -1.73
NUP54-206ENST00000508465 TAGLN3Q9UI15 199 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 PTBP2Q9UKA9 531 aaKnown RBP4.25□□□□□ -1.73
NUP54-206ENST00000508465 ACOT9Q9Y305 439 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 KCNE2Q9Y6J6 123 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 MDC1Q14676 2089 aaKnown RBP4.25□□□□□ -1.73
NUP54-206ENST00000508465 A0A096LPK6 155 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 NSG1A0A0A6YYJ2 146 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 LRIT2A6NDA9 550 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 C4orf51C9J302 202 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 SAP18O00422 153 aaKnown RBP4.24□□□□□ -1.73
NUP54-206ENST00000508465 MAP2K7O14733 419 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 GALR3O60755 368 aaPredicted RBP4.24□□□□□ -1.73
NUP54-206ENST00000508465 STK16O75716 305 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 SIX3O95343 332 aaPredicted RBP4.24□□□□□ -1.73
NUP54-206ENST00000508465 IGHEP01854 428 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 ALDOAP04075 364 aaKnown RBP4.24□□□□□ -1.73
NUP54-206ENST00000508465 PCNAP12004 261 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 COX6A1P12074 109 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 ALOX12P18054 663 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 GNAZP19086 355 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 CD22P20273 847 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 MAOAP21397 527 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 CXCR2P25025 360 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 TYK2P29597 1187 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 HNRNPH1P31943 449 aaKnown RBP4.24□□□□□ -1.73
NUP54-206ENST00000508465 AHRP35869 848 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 GGT5P36269 586 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 MSH2P43246 934 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 SLC6A12P48065 614 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 HNMTP50135 292 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 PLA2G16P53816 162 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 ATP6V0D1P61421 351 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 CDKL1Q00532 357 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 REEP5Q00765 189 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 IRF8Q02556 426 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 RGS1Q08116 209 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 CDC16Q13042 620 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 AIMP2Q13155 320 aaKnown RBP4.24□□□□□ -1.73
NUP54-206ENST00000508465 RUNX2Q13950 521 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 ABRAXAS2Q15018 415 aa4.24□□□□□ -1.73
NUP54-206ENST00000508465 ACAP2Q15057 778 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms