RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 SF3B4Q15427 424 aaKnown RBP eCLIP20.73■□□□□ 0.913e-6■■■■□ 24.5
SPCS3-203ENST00000507678 ATAT1Q5SQI0 421 aa20.73■□□□□ 0.91
SPCS3-203ENST00000507678 USP43Q70EL4 1123 aa20.73■□□□□ 0.91
SPCS3-203ENST00000507678 CADM3Q8N126 398 aa20.73■□□□□ 0.91
SPCS3-203ENST00000507678 GPA33Q99795 319 aa20.73■□□□□ 0.91
SPCS3-203ENST00000507678 PSD2Q9BQI7 771 aa20.73■□□□□ 0.91
SPCS3-203ENST00000507678 TRIOO75962 3097 aa20.73■□□□□ 0.91
SPCS3-203ENST00000507678 DSPPQ9NZW4 1301 aa20.73■□□□□ 0.91
SPCS3-203ENST00000507678 ARRDC5A6NEK1 342 aa20.72■□□□□ 0.91
SPCS3-203ENST00000507678 DSCR3O14972 297 aa20.72■□□□□ 0.91
SPCS3-203ENST00000507678 PRICKLE3O43900 615 aaPredicted RBP20.72■□□□□ 0.91
SPCS3-203ENST00000507678 CHRM5P08912 532 aaPredicted RBP20.72■□□□□ 0.91
SPCS3-203ENST00000507678 TCEA1P23193 301 aaKnown RBP20.72■□□□□ 0.91
SPCS3-203ENST00000507678 PCYT1AP49585 367 aa20.72■□□□□ 0.91
SPCS3-203ENST00000507678 MLLT1Q03111 559 aaPredicted RBP20.72■□□□□ 0.91
SPCS3-203ENST00000507678 ZER1Q7Z7L7 766 aa20.72■□□□□ 0.91
SPCS3-203ENST00000507678 VRK2Q86Y07 508 aa20.72■□□□□ 0.91
SPCS3-203ENST00000507678 IL17RCQ8NAC3 791 aa20.72■□□□□ 0.91
SPCS3-203ENST00000507678 OR10G6Q8NH81 332 aa20.72■□□□□ 0.91
SPCS3-203ENST00000507678 OR2M4Q96R27 311 aa20.72■□□□□ 0.91
SPCS3-203ENST00000507678 C1QTNF7Q9BXJ2 289 aa20.72■□□□□ 0.91
SPCS3-203ENST00000507678 EHD3Q9NZN3 535 aa20.72■□□□□ 0.91
SPCS3-203ENST00000507678 POU2F3Q9UKI9 436 aa20.72■□□□□ 0.91
SPCS3-203ENST00000507678 EGFP01133 1207 aa20.72■□□□□ 0.91
SPCS3-203ENST00000507678 CSNK2A2P19784 350 aaPredicted RBP20.72■□□□□ 0.91
SPCS3-203ENST00000507678 ACTR1BP42025 376 aa20.72■□□□□ 0.91
SPCS3-203ENST00000507678 SEPHS1P49903 392 aa20.72■□□□□ 0.91
SPCS3-203ENST00000507678 ACTR1AP61163 376 aa20.72■□□□□ 0.91
SPCS3-203ENST00000507678 ILKQ13418 452 aa20.72■□□□□ 0.91
SPCS3-203ENST00000507678 PAQR6Q6TCH4 344 aa20.72■□□□□ 0.91
SPCS3-203ENST00000507678 SIMC1Q8NDZ2 872 aa20.72■□□□□ 0.91
SPCS3-203ENST00000507678 MIR1-1HGQ9H1L0 117 aa20.72■□□□□ 0.91
SPCS3-203ENST00000507678 TRPV5Q9NQA5 729 aa20.72■□□□□ 0.91
SPCS3-203ENST00000507678 MPZL2O60487 215 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 ZNF888P0CJ79 500 aaPredicted RBP20.71■□□□□ 0.91
SPCS3-203ENST00000507678 AVPR1BP47901 424 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 CHRNEQ04844 493 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 IRF3Q14653 427 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 MLC1Q15049 377 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 SMUG1Q53HV7 270 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 C6orf132Q5T0Z8 1188 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 MTSS1LQ765P7 747 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 SHISA5Q8N114 240 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 NUP43Q8NFH3 380 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 TMEM168Q9H0V1 697 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 GON4LQ3T8J9 2241 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 PNMA8CA0A1B0GUJ8 204 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 CPSF4LA6NMK7 179 aaKnown RBP20.71■□□□□ 0.91
SPCS3-203ENST00000507678 ARHGAP33O14559 1287 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 RASGRP1O95267 797 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 RNF144AP50876 292 aaPredicted RBP20.71■□□□□ 0.91
SPCS3-203ENST00000507678 OLR1P78380 273 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 SLC48A1Q6P1K1 146 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 KIAA1324Q6UXG2 1013 aaKnown RBP20.71■□□□□ 0.91
SPCS3-203ENST00000507678 ELSPBP1Q96BH3 223 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 OR7D2Q96RA2 312 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 GPR55Q9Y2T6 319 aaPredicted RBP20.71■□□□□ 0.91
SPCS3-203ENST00000507678 COLEC10Q9Y6Z7 277 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 SH3D21A4FU49 640 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 METTL15A6NJ78 407 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 PRKYO43930 277 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 KIAA0513O60268 411 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 F3P13726 295 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 MPIP34949 423 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 DLX2Q07687 328 aaPredicted RBP20.71■□□□□ 0.91
SPCS3-203ENST00000507678 HYAL1Q12794 435 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 MAP4K2Q12851 820 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 FBXO43Q4G163 708 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 ZNF311Q5JNZ3 666 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 MRM1Q6IN84 353 aaKnown RBP20.71■□□□□ 0.91
SPCS3-203ENST00000507678 TMEFF1Q8IYR6 380 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 AMER2Q8N7J2 671 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 SIPA1Q96FS4 1042 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 CRELD1Q96HD1 420 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 SRMSQ9H3Y6 488 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 EGLN3Q9H6Z9 239 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 MAN2C1Q9NTJ4 1040 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 NTNG1Q9Y2I2 539 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 ZNF780BQ9Y6R6 833 aa20.71■□□□□ 0.91
SPCS3-203ENST00000507678 A0A1W2PQF6 199 aa20.7■□□□□ 0.9
SPCS3-203ENST00000507678 ZNF860A6NHJ4 632 aa20.7■□□□□ 0.9
SPCS3-203ENST00000507678 WWP2O00308 870 aa20.7■□□□□ 0.9
SPCS3-203ENST00000507678 TBX1O43435 398 aa20.7■□□□□ 0.9
SPCS3-203ENST00000507678 FHP07954 510 aa20.7■□□□□ 0.9
SPCS3-203ENST00000507678 HOXD11P31277 338 aaPredicted RBP20.7■□□□□ 0.9
SPCS3-203ENST00000507678 ID2Q02363 134 aa20.7■□□□□ 0.9
SPCS3-203ENST00000507678 SLC13A2Q13183 592 aa20.7■□□□□ 0.9
SPCS3-203ENST00000507678 OXA1LQ15070 435 aa20.7■□□□□ 0.9
SPCS3-203ENST00000507678 SLX4IPQ5VYV7 408 aa20.7■□□□□ 0.9
SPCS3-203ENST00000507678 ZNF367Q7RTV3 350 aa20.7■□□□□ 0.9
SPCS3-203ENST00000507678 CYP4Z2PQ8N1L4 340 aa20.7■□□□□ 0.9
SPCS3-203ENST00000507678 KCNS3Q9BQ31 491 aa20.7■□□□□ 0.9
SPCS3-203ENST00000507678 TSSK6Q9BXA6 273 aa20.7■□□□□ 0.9
SPCS3-203ENST00000507678 GIMAP4Q9NUV9 329 aa20.7■□□□□ 0.9
SPCS3-203ENST00000507678 SLC13A4Q9UKG4 626 aa20.7■□□□□ 0.9
SPCS3-203ENST00000507678 FAM47E-STBD1D6RA91 191 aa20.7■□□□□ 0.9
SPCS3-203ENST00000507678 PROM1O43490 865 aa20.7■□□□□ 0.9
SPCS3-203ENST00000507678 DNAJB6O75190 326 aa20.7■□□□□ 0.9
SPCS3-203ENST00000507678 GUCY1B2O75343 617 aa20.7■□□□□ 0.9
SPCS3-203ENST00000507678 ACSL1P33121 698 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms