RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 BHLHE22Q8NFJ8 381 aaPredicted RBP2.9□□□□□ -1.95
TCOF1-208ENST00000506063 OR1J4Q8NGS1 313 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 OR14L1PQ8NHC6 308 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 RDH11Q8TC12 318 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 NT5CQ8TCD5 201 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.9□□□□□ -1.95
TCOF1-208ENST00000506063 ATG4AQ8WYN0 398 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 ANP32BQ92688 251 aaKnown RBP2.9□□□□□ -1.95
TCOF1-208ENST00000506063 DAZLQ92904 295 aaKnown RBP2.9□□□□□ -1.95
TCOF1-208ENST00000506063 CDKN2AIPNLQ96HQ2 116 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 GMPPAQ96IJ6 420 aaPredicted RBP2.9□□□□□ -1.95
TCOF1-208ENST00000506063 MAP6Q96JE9 813 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 CCDC42Q96M95 316 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 FCRL5Q96RD9 977 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 CSF3RQ99062 836 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 ZNF670Q9BS34 389 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 CARD6Q9BX69 1037 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 HSD3B7Q9H2F3 369 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 SPNS1Q9H2V7 528 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 RHBGQ9H310 441 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 KLHL31Q9H511 634 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 FOLH1BQ9HBA9 442 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 GALNT9Q9HCQ5 603 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 TCF7L1Q9HCS4 588 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 PRTFDC1Q9NRG1 225 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 ABHD10Q9NUJ1 306 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 NLE1Q9NVX2 485 aaPredicted RBP2.9□□□□□ -1.95
TCOF1-208ENST00000506063 UTP6Q9NYH9 597 aaKnown RBP2.9□□□□□ -1.95
TCOF1-208ENST00000506063 TAS2R10Q9NYW0 307 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 TREM2Q9NZC2 230 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 CTTNBP2NLQ9P2B4 639 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 UVRAGQ9P2Y5 699 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 XPR1Q9UBH6 696 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 ASH2LQ9UBL3 628 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 IP6K2Q9UHH9 426 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 FBXL2Q9UKC9 423 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 UTS2RQ9UKP6 389 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 EXO1Q9UQ84 846 aaKnown RBP2.9□□□□□ -1.95
TCOF1-208ENST00000506063 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.9□□□□□ -1.95
TCOF1-208ENST00000506063 MRPS18CQ9Y3D5 142 aaKnown RBP2.9□□□□□ -1.95
TCOF1-208ENST00000506063 PMF1-BGLAPU3KQ54 211 aa2.9□□□□□ -1.95
TCOF1-208ENST00000506063 DMBT1Q9UGM3 2413 aaPredicted RBP2.89□□□□□ -1.95
TCOF1-208ENST00000506063 A0A0G2JMP0 313 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 A0A0X1KG70 313 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 MDFIC2A0A1B0GVS7 189 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 MACROD2A1Z1Q3 448 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 CCDC151A5D8V7 595 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 LRRC10BA6NIK2 292 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 AKR1B15C9JRZ8 316 aaPredicted RBP2.89□□□□□ -1.95
TCOF1-208ENST00000506063 GPR37O15354 613 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 NDUFS4O43181 175 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 PLPP2O43688 288 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 PIP5K1CO60331 668 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 ICOSLGO75144 302 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 AVILO75366 819 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 PSIP1O75475 530 aaKnown RBP2.89□□□□□ -1.95
TCOF1-208ENST00000506063 REM1O75628 298 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 CBR3O75828 277 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 ADAP00813 363 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 TFP02787 698 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 FTLP02792 175 aaPredicted RBP2.89□□□□□ -1.95
TCOF1-208ENST00000506063 ALDOAP04075 364 aaKnown RBP2.89□□□□□ -1.95
TCOF1-208ENST00000506063 PTMAP06454 111 aaKnown RBP2.89□□□□□ -1.95
TCOF1-208ENST00000506063 APOA4P06727 396 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 RHOXF2BP0C7M4 288 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 SLC35G6P0C7Q6 338 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 OR56A5P0C7T3 313 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 NHLRC4P0CG21 123 aaPredicted RBP2.89□□□□□ -1.95
TCOF1-208ENST00000506063 DHRS4L1P0CG22 281 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 SKILP12757 684 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 LYL1P12980 280 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 IL32P24001 234 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 IMPA1P29218 277 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 PPOXP50336 477 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 RAB8AP61006 207 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 IGLV3-21P80748 117 aaPredicted RBP2.89□□□□□ -1.95
TCOF1-208ENST00000506063 MPP3Q13368 585 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 PWP1Q13610 501 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 NR1I3Q14994 352 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 SLC18A3Q16572 532 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 FASTKD1Q53R41 847 aaKnown RBP2.89□□□□□ -1.95
TCOF1-208ENST00000506063 DEFB121Q5J5C9 76 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 E4F1Q66K89 784 aaPredicted RBP2.89□□□□□ -1.95
TCOF1-208ENST00000506063 SLC9A4Q6AI14 798 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 ALKBH5Q6P6C2 394 aaKnown RBP2.89□□□□□ -1.95
TCOF1-208ENST00000506063 ZNF549Q6P9A3 640 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 AAGABQ6PD74 315 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 NPNTQ6UXI9 565 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 RBMS3Q6XE24 437 aaKnown RBP2.89□□□□□ -1.95
TCOF1-208ENST00000506063 RNF111Q6ZNA4 994 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 TAS2R42Q7RTR8 314 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 BHLHA15Q7RTS1 189 aaPredicted RBP2.89□□□□□ -1.95
TCOF1-208ENST00000506063 ZNF571Q7Z3V5 609 aaPredicted RBP2.89□□□□□ -1.95
TCOF1-208ENST00000506063 NUFIP2Q7Z417 695 aaKnown RBP2.89□□□□□ -1.95
TCOF1-208ENST00000506063 IRF2BP2Q7Z5L9 587 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 STRA8Q7Z7C7 330 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 GGNQ86UU5 652 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 MAP7D3Q8IWC1 876 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 UBQLNLQ8IYU4 475 aa2.89□□□□□ -1.95
TCOF1-208ENST00000506063 RAB42Q8N4Z0 105 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms