RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 EPHB6O15197 1021 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 MATN3O15232 486 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 RRP8O43159 456 aaKnown RBP3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 TLX3O43711 291 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 KIAA0513O60268 411 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 TSPAN2O60636 221 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 RFPL2O75678 378 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 NDUFB8O95169 186 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 SYF2O95926 243 aaKnown RBP3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 CRYGCP07315 174 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 ERCC1P07992 297 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 PPIAL4FP0DN26 164 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 PRKAR1AP10644 381 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 UMPSP11172 480 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 POU2F1P14859 743 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 ZNF24P17028 368 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 GM2AP17900 193 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 SRMP19623 302 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 GTF2E2P29084 291 aaKnown RBP3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 HMOX2P30519 316 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 YWHABP31946 246 aaKnown RBP3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 CCR4P51679 360 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 NDST1P52848 882 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 BTG1P62324 171 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 EEF1A1P68104 462 aaKnown RBP3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 MRPS6P82932 125 aaKnown RBP3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 NAAAQ02083 359 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 BST2Q10589 180 aaKnown RBP3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 TRAF1Q13077 416 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 KLF5Q13887 457 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 GPR176Q14439 515 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 HNF4GQ14541 408 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 PTGR1Q14914 329 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 KIR2DS5Q14953 304 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 TAF13Q15543 124 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 MICBQ29980 383 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 MTHFSDQ2M296 383 aaKnown RBP3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 C6orf226Q5I0X4 101 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 C6orf183Q5T699 404 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 DCAF12Q5T6F0 453 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 LCN1P1Q5VSP4 162 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 EEF1A1P5Q5VTE0 462 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 TRNP1Q6NT89 227 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 STEAP1BQ6NZ63 245 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 TRIM65Q6PJ69 517 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 UQCC3Q6UW78 93 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 OLFML1Q6UWY5 402 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 Q6YL49 198 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 NLRP9Q7RTR0 991 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 SSX9Q7RTT3 188 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 PIWIL4Q7Z3Z4 852 aaKnown RBP3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 VRK3Q8IV63 474 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 DCP1BQ8IZD4 617 aaKnown RBP3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 ALLCQ8N6M5 410 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 OR5AU1Q8NGC0 362 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 OR51G2Q8NGK0 314 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 LKAAEAR1Q8TD35 194 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 GPX8Q8TED1 209 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 PDCD6IPQ8WUM4 868 aaKnown RBP3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 TANKQ92844 425 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 LHX4Q969G2 390 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 SLC38A4Q969I6 547 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 MRPL24Q96A35 216 aaKnown RBP3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 ZNF707Q96C28 371 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 ABHD8Q96I13 439 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 PPP1R16AQ96I34 528 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 ZNF396Q96N95 335 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 SIGLEC11Q96RL6 698 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 IL12RB2Q99665 862 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 APOOQ9BUR5 198 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 TRIM62Q9BVG3 475 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 SPRY4Q9C004 299 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 KLK15Q9H2R5 256 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 PELI2Q9HAT8 420 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 IL1RL2Q9HB29 575 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 SLC25A19Q9HC21 320 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 FGF21Q9NSA1 209 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 SMOXQ9NWM0 555 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 NLGN3Q9NZ94 848 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 FLRT3Q9NZU0 649 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 IKZF2Q9UKS7 526 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 IKZF3Q9UKT9 509 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 PRPF19Q9UMS4 504 aaKnown RBP3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 RNF115Q9Y4L5 304 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 PPIAL4AQ9Y536 164 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 RAI2Q9Y5P3 530 aa3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 KLF2Q9Y5W3 355 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P22-201ENST00000505315 TRAV25A0A0B4J276 109 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 A0A0G2JK05 382 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 A0A1W2PPV4 95 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 LOC390937A0A1W2PQ73 354 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 RPS10-NUDT3A0A1W2PQS6 291 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 LINC01553A4QN01 128 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 MANSC4A6NHS7 340 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 SNURFLB1AK76 121 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 K7ESM1 405 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 HAS3O00219 553 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 HIP1O00291 1037 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 EI24O14681 340 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms