RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 DMRTC2Q8IXT2 367 aaPredicted RBP14.87□□□□□ -0.03
SCLT1-204ENST00000503215 ULK2Q8IYT8 1036 aa14.87□□□□□ -0.03
SCLT1-204ENST00000503215 CCDC116Q8IYX3 515 aa14.87□□□□□ -0.03
SCLT1-204ENST00000503215 EBPLQ9BY08 206 aa14.87□□□□□ -0.03
SCLT1-204ENST00000503215 UBQLN3Q9H347 655 aa14.87□□□□□ -0.03
SCLT1-204ENST00000503215 C12orf65Q9H3J6 166 aaKnown RBP14.87□□□□□ -0.03
SCLT1-204ENST00000503215 GSTO2Q9H4Y5 243 aa14.87□□□□□ -0.03
SCLT1-204ENST00000503215 MCCC2Q9HCC0 563 aa14.87□□□□□ -0.03
SCLT1-204ENST00000503215 UTS2RQ9UKP6 389 aa14.87□□□□□ -0.03
SCLT1-204ENST00000503215 F8P00451 2351 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 C15orf38-AP3S2A0A0A6YYH1 394 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 GOLGA6L10A6NI86 522 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 CAPN14A8MX76 684 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 G3V2L1 256 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 GNB5O14775 395 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 PCDH7O60245 1069 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 ULK1O75385 1050 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 PPM1BO75688 479 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 ESRRBO95718 433 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 HMOX2P30519 316 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 PTGDSP41222 190 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 ZFP36L2P47974 494 aaKnown RBP14.86□□□□□ -0.03
SCLT1-204ENST00000503215 CDK9P50750 372 aaKnown RBP14.86□□□□□ -0.03
SCLT1-204ENST00000503215 NRG3P56975 720 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 CRYZQ08257 329 aaKnown RBP14.86□□□□□ -0.03
SCLT1-204ENST00000503215 DCST1Q5T197 706 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 C6orf163Q5TEZ5 329 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 CCNYL1Q8N7R7 359 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 C17orf47Q8NEP4 570 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 C16orf78Q8WTQ4 265 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 KAT2AQ92830 837 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 HGDQ93099 445 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 EXOSC8Q96B26 276 aaKnown RBP14.86□□□□□ -0.03
SCLT1-204ENST00000503215 OMA1Q96E52 524 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 L3HYPDHQ96EM0 354 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 TIMP4Q99727 224 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 FAIM2Q9BWQ8 316 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 GALNT9Q9HCQ5 603 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 TNFRSF12AQ9NP84 129 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 NMRK1Q9NWW6 199 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 QPCTLQ9NXS2 382 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 PSMC3IPQ9P2W1 217 aaPredicted RBP14.86□□□□□ -0.03
SCLT1-204ENST00000503215 MCM8Q9UJA3 840 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 C15orf41Q9Y2V0 281 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 AKAP9Q99996 3911 aa14.86□□□□□ -0.03
SCLT1-204ENST00000503215 UGT2B11O75310 529 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 SNX4O95219 450 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 HOXD4P09016 255 aaPredicted RBP14.85□□□□□ -0.03
SCLT1-204ENST00000503215 HSD3B1P14060 373 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 HSD3B2P26439 372 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 SLCO1A2P46721 670 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 MASP1P48740 699 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 TRA2BP62995 288 aaKnown RBP14.85□□□□□ -0.03
SCLT1-204ENST00000503215 CSTF3Q12996 717 aaKnown RBP14.85□□□□□ -0.03
SCLT1-204ENST00000503215 LCP2Q13094 533 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 ZNF628Q5EBL2 1059 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 WIPI1Q5MNZ9 446 aaPredicted RBP14.85□□□□□ -0.03
SCLT1-204ENST00000503215 TBCELQ5QJ74 424 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 PACS2Q86VP3 889 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 LIX1Q8N485 282 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 NAXEQ8NCW5 288 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 OR9A2Q8NGT5 310 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 ACMSDQ8TDX5 336 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 C11orf24Q96F05 449 aaPredicted RBP14.85□□□□□ -0.03
SCLT1-204ENST00000503215 LCORQ96JN0 433 aaPredicted RBP14.85□□□□□ -0.03
SCLT1-204ENST00000503215 SECISBP2Q96T21 854 aaKnown RBP14.85□□□□□ -0.03
SCLT1-204ENST00000503215 B4GALT7Q9UBV7 327 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 PSME2Q9UL46 239 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 ZNF780BQ9Y6R6 833 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 EXPH5Q8NEV8 1989 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 KIAA1549Q9HCM3 1950 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 HPNP05981 417 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 PTPN6P29350 595 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 CORO7P57737 925 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 CBX1P83916 185 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 TOMM20Q15388 145 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 TIGD3Q6B0B8 471 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 ANGPTL8Q6UXH0 198 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 WDR53Q7Z5U6 358 aaPredicted RBP14.85□□□□□ -0.03
SCLT1-204ENST00000503215 YRDCQ86U90 279 aaKnown RBP14.85□□□□□ -0.03
SCLT1-204ENST00000503215 LCA5Q86VQ0 697 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 SLC22A9Q8IVM8 553 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 TNIP2Q8NFZ5 429 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 TMEM41AQ96HV5 264 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 METTL7AQ9H8H3 244 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 MID1IP1Q9NPA3 183 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 PFDN4Q9NQP4 134 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 FETUBQ9UGM5 382 aa14.85□□□□□ -0.03
SCLT1-204ENST00000503215 GNG14A0A1W2PPG7 69 aa14.84□□□□□ -0.03
SCLT1-204ENST00000503215 ICOSLGO75144 302 aa14.84□□□□□ -0.03
SCLT1-204ENST00000503215 PROCP04070 461 aa14.84□□□□□ -0.03
SCLT1-204ENST00000503215 ENO1P06733 434 aaKnown RBP14.84□□□□□ -0.03
SCLT1-204ENST00000503215 GSTA1P08263 222 aa14.84□□□□□ -0.03
SCLT1-204ENST00000503215 GABRA1P14867 456 aa14.84□□□□□ -0.03
SCLT1-204ENST00000503215 BMP7P18075 431 aa14.84□□□□□ -0.03
SCLT1-204ENST00000503215 KRT15P19012 456 aa14.84□□□□□ -0.03
SCLT1-204ENST00000503215 DRD5P21918 477 aa14.84□□□□□ -0.03
SCLT1-204ENST00000503215 TIA1P31483 386 aaKnown RBP eCLIP14.84□□□□□ -0.03
SCLT1-204ENST00000503215 PPICP45877 212 aa14.84□□□□□ -0.03
SCLT1-204ENST00000503215 TMED10P49755 219 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms