RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 SLC25A36Q96CQ1 311 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 RAB33BQ9H082 229 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 RMND5AQ9H871 391 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 STARD5Q9NSY2 213 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 GDAP2Q9NXN4 497 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 ICAM5Q9UMF0 924 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 CROCC2H7BZ55 1655 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 STRCP1A6NGW2 1772 aa4.5□□□□□ -1.69
HMGB1P3-201ENST00000502802 A2ML1A8K2U0 1454 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 PLA2R1Q13018 1463 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 TCOF1Q13428 1488 aaKnown RBP4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 LRRC9Q6ZRR7 1453 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 AFF2P51816 1311 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 NEURL4Q96JN8 1562 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 MAST1Q9Y2H9 1570 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 VPS8Q8N3P4 1428 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 CLRN2A0PK11 232 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 EME2A4GXA9 379 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 H3BTX0 84 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 ANXA4P09525 319 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 PRKACGP22612 351 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 HTR2AP28223 471 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 PDHA2P29803 388 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 SLC1A6P48664 564 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 NAPAP54920 295 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 PPIAP62937 165 aaKnown RBP4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 MLF2Q15773 248 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 MTHFSDQ2M296 383 aaKnown RBP4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 ZNF699Q32M78 642 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 ANKRD55Q3KP44 614 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 SLC36A3Q495N2 470 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 ZNF311Q5JNZ3 666 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 TCHHL1Q5QJ38 904 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 ATAD3BQ5T9A4 648 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 NCR3LG1Q68D85 454 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 CASC1Q6TDU7 716 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 C3P1Q6ZMU1 363 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 FRRS1Q6ZNA5 592 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 P4HA3Q7Z4N8 544 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 GRAMD2AQ8IUY3 354 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 UNC5CLQ8IV45 518 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 CCDC36Q8IYA8 594 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 ARFGAP2Q8N6H7 521 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 CHDHQ8NE62 594 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 CNRIP1Q96F85 164 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 LRR1Q96L50 414 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 ANKRD27Q96NW4 1050 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 PGLYRP2Q96PD5 576 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 USP28Q96RU2 1077 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 LRRCC1Q9C099 1032 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 TMEM117Q9H0C3 514 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 RPAP3Q9H6T3 665 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 SPHK2Q9NRA0 654 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 PLCXD1Q9NUJ7 323 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 FKBP7Q9Y680 259 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 IKBKGQ9Y6K9 419 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 MAP3K1Q13233 1512 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 KDM5DQ9BY66 1539 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 KDRP35968 1356 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 MROH1Q8NDA8 1641 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 PARD3Q8TEW0 1356 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 EIF2AK4Q9P2K8 1649 aaKnown RBP4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 IQSEC2Q5JU85 1478 aa4.49□□□□□ -1.69
HMGB1P3-201ENST00000502802 ZC3H13Q5T200 1668 aaKnown RBP4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 FAM135AQ9P2D6 1515 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 IGHV3-20A0A0C4DH32 117 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 TRIM64CA6NLI5 447 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 WASH3PC4AMC7 463 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 TBX19O60806 448 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 PRAMEF12O95522 483 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 TSPAN8P19075 237 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 AOC1P19801 751 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 DRD5P21918 477 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 TRIM23P36406 574 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 NDST2P52849 883 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 GBX2P52951 348 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 SRYQ05066 204 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 ZNF177Q13360 481 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 ENPP2Q13822 863 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 EXOSC2Q13868 293 aaKnown RBP4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 TPD52L1Q16890 204 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 DCAF4L1Q3SXM0 396 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 POM121L1PQ3SYA9 428 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 SLC39A4Q6P5W5 647 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 CBLN3Q6UW01 205 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 LCLAT1Q6UWP7 414 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 WASH2PQ6VEQ5 465 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 LHFPL4Q7Z7J7 247 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 FAM131BQ86XD5 332 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 ZDHHC21Q8IVQ6 265 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 NUP37Q8NFH4 326 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 FAM76AQ8TAV0 307 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 ZNF519Q8TB69 540 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 PCNPQ8WW12 178 aaKnown RBP4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 SLC5A11Q8WWX8 675 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 N4BP2L2Q92802 583 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 VSTM2LQ96N03 204 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 VPS35Q96QK1 796 aa4.48□□□□□ -1.69
HMGB1P3-201ENST00000502802 TSPAN18Q96SJ8 248 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms