RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 RGSL1A5PLK6 1076 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 TRPC5OSA6NMA1 111 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 ZNF701M0R085 212 aaPredicted RBP4.34□□□□□ -1.71
SSR3-209ENST00000498205 TO15178 435 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 B4GALT5O43286 388 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 BANF1O75531 89 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 NEBLO76041 1014 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 PAK4O96013 591 aaPredicted RBP4.34□□□□□ -1.71
SSR3-209ENST00000498205 TPOP07202 933 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 IQCF3P0C7M6 154 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 PRSS56P0CW18 603 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 RALBP11234 206 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 CYP2B6P20813 491 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 PAX7P23759 505 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 SLC6A6P31641 620 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 NRIP1P48552 1158 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 LHX1P48742 406 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 ACADVLP49748 655 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 TAF6P49848 677 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 ATP4BP51164 291 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 CDK3Q00526 305 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 GBE1Q04446 702 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 CDH17Q12864 832 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 OVGP1Q12889 678 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 TRAP1Q12931 704 aaKnown RBP4.34□□□□□ -1.71
SSR3-209ENST00000498205 MSLNQ13421 630 aaPredicted RBP4.34□□□□□ -1.71
SSR3-209ENST00000498205 MED21Q13503 144 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 RCN2Q14257 317 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 MAPRE2Q15555 327 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 GOLGA7BQ2TAP0 167 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 KIAA1644Q3SXP7 199 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 ANKRD20A4Q4UJ75 823 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 LIN52Q52LA3 116 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 HSP90AA5PQ58FG0 334 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 COQ5Q5HYK3 327 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 N4BP2L1Q5TBK1 243 aaPredicted RBP4.34□□□□□ -1.71
SSR3-209ENST00000498205 C1orf146Q5VVC0 180 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 RFWD3Q6PCD5 774 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 DCLRE1AQ6PJP8 1040 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 SCARA5Q6ZMJ2 495 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 ZNF554Q86TJ5 538 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 LDB1Q86U70 411 aaPredicted RBP4.34□□□□□ -1.71
SSR3-209ENST00000498205 ST13P4Q8IZP2 240 aaPredicted RBP4.34□□□□□ -1.71
SSR3-209ENST00000498205 PGAM4Q8N0Y7 254 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 PACRGLQ8N7B6 248 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 ZBTB8BQ8NAP8 495 aaPredicted RBP4.34□□□□□ -1.71
SSR3-209ENST00000498205 DDI1Q8WTU0 396 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 RNF139Q8WU17 664 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 DEPDC1BQ8WUY9 529 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 FCAMRQ8WWV6 532 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 DAZLQ92904 295 aaKnown RBP4.34□□□□□ -1.71
SSR3-209ENST00000498205 POP5Q969H6 163 aaKnown RBP4.34□□□□□ -1.71
SSR3-209ENST00000498205 PPP1R14BQ96C90 147 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 ERLEC1Q96DZ1 483 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 OR6C1Q96RD1 312 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 BARD1Q99728 777 aaKnown RBP4.34□□□□□ -1.71
SSR3-209ENST00000498205 RHNO1Q9BSD3 238 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 C16orf70Q9BSU1 422 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 SPATA16Q9BXB7 569 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 DUSP16Q9BY84 665 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 KLHL4Q9C0H6 718 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 ILKAPQ9H0C8 392 aaPredicted RBP4.34□□□□□ -1.71
SSR3-209ENST00000498205 GBA3Q9H227 469 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 SNX25Q9H3E2 840 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 SLA2Q9H6Q3 261 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 WSB2Q9NYS7 404 aaPredicted RBP4.34□□□□□ -1.71
SSR3-209ENST00000498205 TXNDC16Q9P2K2 825 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 THEGQ9P2T0 379 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 HMGXB4Q9UGU5 601 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 CIDEBQ9UHD4 219 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 PTBP2Q9UKA9 531 aaKnown RBP4.34□□□□□ -1.71
SSR3-209ENST00000498205 PLAGL1Q9UM63 463 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 Q9Y3F1 56 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 NRCAMQ92823 1304 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 MCM3APO60318 1980 aa4.34□□□□□ -1.71
SSR3-209ENST00000498205 SBF1O95248 1867 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 A0A1W2PN81 502 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 A0A1W2PRB8 838 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 G3V2L1 256 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 GOLGA8RI6L899 631 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 RNF103O00237 685 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 SMIM24O75264 130 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 BCAS2O75934 225 aaPredicted RBP4.33□□□□□ -1.72
SSR3-209ENST00000498205 ANXA9O76027 345 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 DDHD2O94830 711 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 TNFAIP8O95379 198 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 CLPTM1O96005 669 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 PATE4P0C8F1 98 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 COX4I1P13073 169 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 DARSP14868 501 aaKnown RBP4.33□□□□□ -1.72
SSR3-209ENST00000498205 VCLP18206 1134 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 CD9P21926 228 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 EPHA2P29317 976 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 CHRNA7P36544 502 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 RPL5P46777 297 aaKnown RBP4.33□□□□□ -1.72
SSR3-209ENST00000498205 VEGFCP49767 419 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 RPL14P50914 215 aaKnown RBP4.33□□□□□ -1.72
SSR3-209ENST00000498205 SUOXP51687 545 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 CCNHP51946 323 aaPredicted RBP4.33□□□□□ -1.72
SSR3-209ENST00000498205 THOP1P52888 689 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms