RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 ZNF791Q3KP31 576 aaPredicted RBP8.1□□□□□ -1.11
ITGB1-217ENST00000494395 ZNF385BQ569K4 471 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 TTMPQ5BVD1 217 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 ZNF628Q5EBL2 1059 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 FHL5Q5TD97 284 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 SLC25A25Q6KCM7 469 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 LYPD4Q6UWN0 246 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 RNF111Q6ZNA4 994 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 IKBIPQ70UQ0 350 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 GALNTL5Q7Z4T8 443 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 MDGA2Q7Z553 956 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 GPALPP1Q8IXQ4 340 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 CYP4Z2PQ8N1L4 340 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 LRRC25Q8N386 305 aaPredicted RBP8.1□□□□□ -1.11
ITGB1-217ENST00000494395 ZNF781Q8N8C0 355 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 ANKRD42Q8N9B4 389 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 SIMC1Q8NDZ2 872 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 OR7G1Q8NGA0 311 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 OR5L2Q8NGL0 311 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 C16orf52Q8NHV5 167 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 ADIPOR1Q96A54 375 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 OR10A5Q9H207 317 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 SH2D2AQ9NP31 389 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 SLC35C2Q9NQQ7 365 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 KLHL1Q9NR64 748 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.1□□□□□ -1.11
ITGB1-217ENST00000494395 GIMAP2Q9UG22 337 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 PSME2Q9UL46 239 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 DTX4Q9Y2E6 619 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 TMED5Q9Y3A6 229 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 RAP2CQ9Y3L5 183 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 BAHCC1Q9P281 2608 aa8.1□□□□□ -1.11
ITGB1-217ENST00000494395 POLEQ07864 2286 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 HIVEP3Q5T1R4 2406 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 ATP6AP2A0A1C7CYW4 349 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 A8MVJ9 347 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 LINC01387J3KSC0 135 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 SNNO75324 88 aaPredicted RBP8.09□□□□□ -1.11
ITGB1-217ENST00000494395 SKAP2O75563 359 aaPredicted RBP8.09□□□□□ -1.11
ITGB1-217ENST00000494395 ATP6AP2O75787 350 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 SNUPNO95149 360 aaKnown RBP8.09□□□□□ -1.11
ITGB1-217ENST00000494395 RASAL1O95294 804 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 HSPA4LO95757 839 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 PF4P02776 101 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 BCKDHAP12694 445 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 NT5EP21589 574 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 GPX3P22352 226 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 GNLYP22749 145 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 MST1P26927 711 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 FRKP42685 505 aaPredicted RBP8.09□□□□□ -1.11
ITGB1-217ENST00000494395 EMDP50402 254 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 OC90Q02509 493 aaPredicted RBP8.09□□□□□ -1.11
ITGB1-217ENST00000494395 C2orf80Q0P641 193 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 BST1Q10588 318 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 STX3Q13277 289 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 MRPL49Q13405 166 aaKnown RBP8.09□□□□□ -1.11
ITGB1-217ENST00000494395 EXOSC7Q15024 291 aaKnown RBP8.09□□□□□ -1.11
ITGB1-217ENST00000494395 TRMT12Q53H54 448 aaKnown RBP8.09□□□□□ -1.11
ITGB1-217ENST00000494395 C6orf136Q5SQH8 315 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 FAM180AQ6UWF9 173 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 SLC29A4Q7RTT9 530 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 WFDC8Q8IUA0 241 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 TICAM1Q8IUC6 712 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 SIAH3Q8IW03 269 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 DDIASQ8IXT1 998 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 SAMD14Q8IZD0 417 aaPredicted RBP8.09□□□□□ -1.11
ITGB1-217ENST00000494395 TMEM156Q8N614 296 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 SLC15A4Q8N697 577 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 HORMAD2Q8N7B1 307 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 BCORP1Q8N888 145 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 TMEM178AQ8NBL3 297 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 ST6GALNAC3Q8NDV1 305 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 C17orf47Q8NEP4 570 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 ADCY4Q8NFM4 1077 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 DNAJB8Q8NHS0 232 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 PPP1R14CQ8TAE6 165 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 STK35Q8TDR2 534 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 ASB15Q8WXK1 588 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 NR4A3Q92570 626 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 TP53INP1Q96A56 240 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 EXOSC8Q96B26 276 aaKnown RBP8.09□□□□□ -1.11
ITGB1-217ENST00000494395 NTNG2Q96CW9 530 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 ERP27Q96DN0 273 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 PPP3R2Q96LZ3 170 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 VIPAS39Q9H9C1 493 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 DEPPQ9NTK1 212 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 HPF1Q9NWY4 346 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 ZNF780BQ9Y6R6 833 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 NCKAP5O14513 1909 aa8.09□□□□□ -1.11
ITGB1-217ENST00000494395 PRRC2CQ9Y520 2896 aaKnown RBP8.08□□□□□ -1.12
ITGB1-217ENST00000494395 MYO18BQ8IUG5 2567 aa8.08□□□□□ -1.12
ITGB1-217ENST00000494395 PLOD3O60568 738 aa8.08□□□□□ -1.12
ITGB1-217ENST00000494395 PEX11AO75192 247 aa8.08□□□□□ -1.12
ITGB1-217ENST00000494395 VPS4BO75351 444 aa8.08□□□□□ -1.12
ITGB1-217ENST00000494395 PSMG1O95456 288 aa8.08□□□□□ -1.12
ITGB1-217ENST00000494395 IFI6P09912 130 aa8.08□□□□□ -1.12
ITGB1-217ENST00000494395 CCL3P10147 92 aa8.08□□□□□ -1.12
ITGB1-217ENST00000494395 DNAJA1P31689 397 aaKnown RBP8.08□□□□□ -1.12
ITGB1-217ENST00000494395 RPL14P50914 215 aaKnown RBP8.08□□□□□ -1.12
ITGB1-217ENST00000494395 MRPS35P82673 323 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms