RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 SZRD1Q7Z422 152 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 CISD2Q8N5K1 135 aaKnown RBP10.73□□□□□ -0.69
CTSA-209ENST00000493522 TMEM156Q8N614 296 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 OR7G1Q8NGA0 311 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 OR52R1Q8NGF1 315 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 NUBPLQ8TB37 319 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 NUDT8Q8WV74 236 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 ASB15Q8WXK1 588 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 ZBED6CLQ96FA7 236 aaPredicted RBP10.73□□□□□ -0.69
CTSA-209ENST00000493522 MAGED4Q96JG8 741 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 PRPF18Q99633 342 aaKnown RBP10.73□□□□□ -0.69
CTSA-209ENST00000493522 EBF4Q9BQW3 602 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 UTP23Q9BRU9 249 aaKnown RBP10.73□□□□□ -0.69
CTSA-209ENST00000493522 ANKRA2Q9H9E1 313 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 FGFR1OP2Q9NVK5 253 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 DCTN4Q9UJW0 460 aa10.73□□□□□ -0.69
CTSA-209ENST00000493522 C2orf92A0A1B0GVN3 265 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 E9PBE3 544 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 UBDO15205 165 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 COQ9O75208 318 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 SLITRK5O94991 958 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 TROVE2P10155 538 aaKnown RBP eCLIP10.72□□□□□ -0.69
CTSA-209ENST00000493522 IDO1P14902 403 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 GPX3P22352 226 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 CDK9P50750 372 aaKnown RBP10.72□□□□□ -0.69
CTSA-209ENST00000493522 MANFP55145 182 aaKnown RBP10.72□□□□□ -0.69
CTSA-209ENST00000493522 C21orf58P58505 322 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 STX1BP61266 288 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 DUSP8Q13202 625 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 TUBA3CQ13748 450 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 ZNF169Q14929 603 aaPredicted RBP10.72□□□□□ -0.69
CTSA-209ENST00000493522 NNATQ16517 81 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 TUBA3EQ6PEY2 450 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 RIMKLAQ8IXN7 391 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 ARMC10Q8N2F6 343 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 ZNF615Q8N8J6 731 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 SIMC1Q8NDZ2 872 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 OR7G2Q8NG99 324 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 C16orf52Q8NHV5 167 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 SLC22A8Q8TCC7 542 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 CTHRC1Q96CG8 243 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 ERP27Q96DN0 273 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 RASL10BQ96S79 203 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 ZBTB18Q99592 522 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 CCDC28BQ9BUN5 200 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 DUSP26Q9BV47 211 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 ITPAQ9BY32 194 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 DDX18Q9NVP1 670 aaKnown RBP10.72□□□□□ -0.69
CTSA-209ENST00000493522 MYOTQ9UBF9 498 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 PRODH2Q9UF12 536 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 ZNF639Q9UID6 485 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 ERVK-11Q9UQG0 969 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 CFL2Q9Y281 166 aa10.72□□□□□ -0.69
CTSA-209ENST00000493522 YARS2Q9Y2Z4 477 aaKnown RBP10.72□□□□□ -0.69
CTSA-209ENST00000493522 COPG1Q9Y678 874 aaKnown RBP10.72□□□□□ -0.69
CTSA-209ENST00000493522 TRAV17A0A0B4J275 112 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 A0A0G2JND7 137 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 A0A1W2PRB8 838 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 TMEM200CA6NKL6 621 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 A8MVJ9 347 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 C9JVG2 144 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 ANKRD28O15084 1053 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 CFLARO15519 480 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 BCAS2O75934 225 aaPredicted RBP10.71□□□□□ -0.69
CTSA-209ENST00000493522 C6orf47O95873 294 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 ABCB1P08183 1280 aaPredicted RBP10.71□□□□□ -0.69
CTSA-209ENST00000493522 S1PR1P21453 382 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 SOAT1P35610 550 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 SOX3P41225 446 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 FRKP42685 505 aaPredicted RBP10.71□□□□□ -0.69
CTSA-209ENST00000493522 KIR3DL1P43629 444 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 CYB561P49447 251 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 TNFSF10P50591 281 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 NR0B1P51843 470 aaKnown RBP10.71□□□□□ -0.69
CTSA-209ENST00000493522 UFM1P61960 85 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 TLR1Q15399 786 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 OR1C1Q15619 314 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 GSTA3Q16772 222 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 DPY19L1Q2PZI1 675 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 FAM174BQ3ZCQ3 159 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 PDCD4Q53EL6 469 aaKnown RBP10.71□□□□□ -0.69
CTSA-209ENST00000493522 SPANXN4Q5MJ08 99 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 ZNF468Q5VIY5 522 aaPredicted RBP10.71□□□□□ -0.69
CTSA-209ENST00000493522 OR4F3Q6IEY1 312 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 Q6ZS92 163 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 CAMKMTQ7Z624 323 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 SLC34A3Q8N130 599 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 CYP4Z2PQ8N1L4 340 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 NINQ8N4C6 2090 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 NATD1Q8N6N6 113 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 CATSPER1Q8NEC5 780 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 RFWD2Q8NHY2 731 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 HAS2Q92819 552 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 TESCQ96BS2 214 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 SIKE1Q9BRV8 207 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 BHLHE41Q9C0J9 482 aaPredicted RBP10.71□□□□□ -0.69
CTSA-209ENST00000493522 CCDC134Q9H6E4 229 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 FOLH1BQ9HBA9 442 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 AGPAT4Q9NRZ5 378 aa10.71□□□□□ -0.69
CTSA-209ENST00000493522 ACSS1Q9NUB1 689 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms